Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30995
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 30 1.3
U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine rece... 30 1.3
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 30 1.8
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 30 1.8
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 29 3.1
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 29 4.1
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 28 5.4
AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical
protein C27B7.4 protein.
Length = 1274
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +2
Query: 386 RLKPEKNQQANGLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLHGSNSE 556
+L+ ++ QQ L G++ GNNG+MP F ++ P+Q + + H +N +
Sbjct: 653 QLQQQQQQQQQQLQGMMMMGNNGMMP-------GFGAQF-HPQQNGMMMQNGSWHPNNYQ 704
Query: 557 FFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTP 667
+ + S+P + T S K+T+K S P
Sbjct: 705 MPSPFNSIPSNPSTPTSSSTSKSAKKTKKPRGSKKAP 741
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 346 SQDSKHFESSRPRSFKARKEPTGERSNRSDSPRK 447
SQDS F SSR +S + K P +R +D +K
Sbjct: 245 SQDSDEFPSSREQSVEKEKSPPAKRKRVNDENKK 278
>U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine
receptor, class xa protein4 protein.
Length = 322
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 38 ILYLLRRLKHCSFKFDSFFTKTESHRTLVL 127
I YL+R CS F +F +T+S R LVL
Sbjct: 266 ITYLVRLFAFCSLNFFVYFVETKSTRNLVL 295
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 254 LKRSPARVGATISELNTPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGL 424
L +S R+G ++++L T + + + FSQ L + ++K +D + +K A L
Sbjct: 1053 LDQSANRLGTSLADLRTSVNDAQQLNFSQQLLYSEELIKELDDQLVNTQKRAIAREL 1109
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 254 LKRSPARVGATISELNTPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGL 424
L +S R+G ++++L T + + + FSQ L + ++K +D + +K A L
Sbjct: 1053 LDQSANRLGTSLADLRTSVNDAQQLNFSQQLLYSEELIKELDDQLVNTQKRAIAREL 1109
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 29.1 bits (62), Expect = 3.1
Identities = 35/131 (26%), Positives = 53/131 (40%)
Frame = +2
Query: 287 ISELNTPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQ 466
+S L T PK L+ +N L+ + DR + + L V Q G++
Sbjct: 76 VSRLPTEADPPKITNLKAAILEEKNRLQKIT-DR-GTVVQKCVDNLDKVFEQVGGGLVNP 133
Query: 467 GTVPTASFSEEYLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKR 646
AS +E L E L +GSNSE ++E + RE+Q + S E E R
Sbjct: 134 PKDGVASLNEGTL--ESLTNFFQFYGSNSELYREKLRSVEAGHREQQEKV--SKLENELR 189
Query: 647 ACSFDTPHTSF 679
A + +F
Sbjct: 190 ALMHNLNEEAF 200
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 494 EEYLKPEQLYASTMLHG-SNSEFFQELDQLCSDPE-REEQTR--TIDSHKETEKR 646
E+Y++ E S + NS+ Q++ L D RE+QTR TIDSHK K+
Sbjct: 276 EKYIQIENELNSKLDEALQNSDKCQKMTSLLEDQLLREQQTRKATIDSHKAQNKK 330
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 539 HGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTPHTS 676
+G SE QEL +P+ T T E E+ CS D T+
Sbjct: 527 NGDLSEDEQELSDALEEPQESPSTSTESQVSEDEEPCCSTDPASTT 572
>AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical
protein K03H6.5 protein.
Length = 434
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 399 SGFKRSRSTTFKMFRVLRLVCEKTMSFGVWIGVLSSDIVAPTRAGDLLSN 250
S F RS+S + ++ C + +F V SS +VAP A L+SN
Sbjct: 365 SNFTRSKSVITQKTSIVYSPCSR--NFSTSRKVSSSSVVAPKGASQLISN 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,350,632
Number of Sequences: 27780
Number of extensions: 322772
Number of successful extensions: 1160
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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