Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30992
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    30   4.0  
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,...    30   4.0  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    30   4.0  

>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein
            heavy chian protein.
          Length = 4639

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/44 (29%), Positives = 29/44 (65%)
 Frame = +3

Query: 408  LSDIIATLQESHLKFKIWKKYHITKKIFFSYLNEVNLIKIQLKT 539
            L  ++A L+E   + ++++ Y   KK+  SY+ +VN++ ++LK+
Sbjct: 1353 LEAMMAQLKELPARLRMYESYEYVKKLIQSYI-KVNMLIVELKS 1395


>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
            isoform B protein.
          Length = 3388

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/44 (29%), Positives = 29/44 (65%)
 Frame = +3

Query: 408  LSDIIATLQESHLKFKIWKKYHITKKIFFSYLNEVNLIKIQLKT 539
            L  ++A L+E   + ++++ Y   KK+  SY+ +VN++ ++LK+
Sbjct: 1353 LEAMMAQLKELPARLRMYESYEYVKKLIQSYI-KVNMLIVELKS 1395


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
            isoform A protein.
          Length = 4639

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/44 (29%), Positives = 29/44 (65%)
 Frame = +3

Query: 408  LSDIIATLQESHLKFKIWKKYHITKKIFFSYLNEVNLIKIQLKT 539
            L  ++A L+E   + ++++ Y   KK+  SY+ +VN++ ++LK+
Sbjct: 1353 LEAMMAQLKELPARLRMYESYEYVKKLIQSYI-KVNMLIVELKS 1395


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,382,699
Number of Sequences: 53049
Number of extensions: 608157
Number of successful extensions: 1262
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)