BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30991
(667 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p pro... 352 2e-97
AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p pro... 352 2e-97
AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal ... 352 2e-97
AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed pr... 352 2e-97
AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed pr... 352 2e-97
AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-P... 352 2e-97
AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal ... 350 9e-97
BT003440-1|AAO39443.1| 632|Drosophila melanogaster RH74545p pro... 29 4.3
AE014134-407|AAF51256.2| 632|Drosophila melanogaster CG9887-PA ... 29 4.3
AY061394-1|AAL28942.1| 629|Drosophila melanogaster LD31822p pro... 28 9.9
AE014134-868|AAF52214.2| 629|Drosophila melanogaster CG31918-PA... 28 9.9
>BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p protein.
Length = 697
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 443 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 502
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 503 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 562
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 563 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 622
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 623 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 663
>AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p protein.
Length = 1063
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 1029
>AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal
region maintenance1 protein protein.
Length = 1063
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 1029
>AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 1029
>AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 1029
>AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-PA
protein.
Length = 1063
Score = 352 bits (866), Expect = 2e-97
Identities = 157/221 (71%), Positives = 196/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE TGEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREATGEDDSDLYLEER 1029
>AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal
region maintenanceprotein CRM1 protein.
Length = 1063
Score = 350 bits (861), Expect = 9e-97
Identities = 156/221 (70%), Positives = 195/221 (88%)
Frame = +2
Query: 2 TSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVL 181
T+EVPKIFDAVFECTL+MINK+FE++P+HR F+ LLQAVN +CFKAFL+IPPAQFKLV
Sbjct: 809 TNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVF 868
Query: 182 DSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSH 361
DS++WAFKHTMRNVAD GL IL+++L N+++HP AAQSFY+TY DIL +FSVVTDTSH
Sbjct: 869 DSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSH 928
Query: 362 GAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKIT 541
AGL HA ILA++FSLVE ++TV LGP PDN+++IQEY+A+LLK+AF+HL+DNQ+K+
Sbjct: 929 TAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQEYVASLLKSAFTHLSDNQVKVF 988
Query: 542 VQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEER 664
V GLFNL++++ AFK+HLRDFL+QIRE GEDDSDLYLEER
Sbjct: 989 VTGLFNLDENVQAFKEHLRDFLIQIREAAGEDDSDLYLEER 1029
>BT003440-1|AAO39443.1| 632|Drosophila melanogaster RH74545p
protein.
Length = 632
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 159 GGMLKNALKQFVLTACSNKKNSVLCSGYSSKSLLIISRVHSKTAS 25
GGML + L++ + + +N + C G+ + L + HS TA+
Sbjct: 380 GGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTAT 424
>AE014134-407|AAF51256.2| 632|Drosophila melanogaster CG9887-PA
protein.
Length = 632
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 159 GGMLKNALKQFVLTACSNKKNSVLCSGYSSKSLLIISRVHSKTAS 25
GGML + L++ + + +N + C G+ + L + HS TA+
Sbjct: 380 GGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTAT 424
>AY061394-1|AAL28942.1| 629|Drosophila melanogaster LD31822p
protein.
Length = 629
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 224 ADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTD 352
A+ L+I+ R+L +++E + +FY + ++ H F+ V+D
Sbjct: 24 ANPNLEIMKRMLDDMDEKVEPCHNFYNSSQKNLKWHAFATVSD 66
>AE014134-868|AAF52214.2| 629|Drosophila melanogaster CG31918-PA
protein.
Length = 629
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 224 ADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTD 352
A+ L+I+ R+L +++E + +FY + ++ H F+ V+D
Sbjct: 24 ANPNLEIMKRMLDDMDEKVEPCHNFYNSSQKNLKWHAFATVSD 66
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,960,208
Number of Sequences: 53049
Number of extensions: 686648
Number of successful extensions: 1514
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -