Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30988
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p pro...    59   5e-09
AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar pro...    59   5e-09
AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA...    59   5e-09

>AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p
           protein.
          Length = 117

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
 Frame = +1

Query: 88  ALRRKSARQGSEKRNA*SRPRRRLKM-KLKSTDRSVK------GSSKNLKPSTWVPGXGV 246
           A  +K+A + +E R    R  RRLK  K ++T+   K       + K  +        GV
Sbjct: 13  AAEKKAAEKVAEARK---RKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGV 69

Query: 247 AAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 381
           AAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 70  AAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 218
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 219 KHMGT 233
           KHMG+
Sbjct: 61  KHMGS 65


>AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar
           proton-motive ATPasesubunit G VHA13 protein.
          Length = 117

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
 Frame = +1

Query: 88  ALRRKSARQGSEKRNA*SRPRRRLKM-KLKSTDRSVK------GSSKNLKPSTWVPGXGV 246
           A  +K+A + +E R    R  RRLK  K ++T+   K       + K  +        GV
Sbjct: 13  AAEKKAAEKVAEARK---RKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGV 69

Query: 247 AAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 381
           AAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 70  AAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 218
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 219 KHMGT 233
           KHMG+
Sbjct: 61  KHMGS 65


>AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA
           protein.
          Length = 117

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
 Frame = +1

Query: 88  ALRRKSARQGSEKRNA*SRPRRRLKM-KLKSTDRSVK------GSSKNLKPSTWVPGXGV 246
           A  +K+A + +E R    R  RRLK  K ++T+   K       + K  +        GV
Sbjct: 13  AAEKKAAEKVAEARK---RKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGV 69

Query: 247 AAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 381
           AAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 70  AAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 218
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 219 KHMGT 233
           KHMG+
Sbjct: 61  KHMGS 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,862,758
Number of Sequences: 53049
Number of extensions: 375468
Number of successful extensions: 1059
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)