Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30987
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens ... 37 0.065
AK126793-1|BAC86696.1| 188|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK127847-1|BAC87159.1| 129|Homo sapiens protein ( Homo sapiens ... 31 5.7
AK126979-1|BAC86774.1| 453|Homo sapiens protein ( Homo sapiens ... 31 5.7
AK001056-1|BAA91484.1| 122|Homo sapiens protein ( Homo sapiens ... 31 5.7
BX537537-1|CAD97777.1| 1142|Homo sapiens hypothetical protein pr... 30 9.9
BC037313-1|AAH37313.1| 902|Homo sapiens ZMYM1 protein protein. 30 9.9
AL607089-7|CAI12903.1| 1067|Homo sapiens zinc finger, MYM-type 1... 30 9.9
AL607089-6|CAI12902.1| 1142|Homo sapiens zinc finger, MYM-type 1... 30 9.9
AL607089-5|CAI12901.1| 462|Homo sapiens zinc finger, MYM-type 1... 30 9.9
>AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ45551 fis, clone BRTHA2037247. ).
Length = 238
Score = 37.1 bits (82), Expect = 0.065
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 463 LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC-KWIASFLDGRNITVVVDG 615
+ +S+D KAF+++ HR +L L GI EG C K I + D R ++++G
Sbjct: 26 MIISIDAEKAFNKIQHRFMLKTLNKLGI-EGPCLKIIRAICDKRTANIILNG 76
>AK126793-1|BAC86696.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ44843 fis, clone BRACE3050270. ).
Length = 188
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 463 LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRNITVVVDG 615
+ +S+D KAFD + H +L L GI K + + D ++++G
Sbjct: 6 MIISIDAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNG 56
>AK127847-1|BAC87159.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45950 fis, clone PLACE7008136. ).
Length = 129
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +1
Query: 454 GEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRNITVVVDGD 618
G + +S+D K FD++ H ++ L GI K I + ++++G+
Sbjct: 32 GNHMIISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIYHKSTANIILNGE 86
>AK126979-1|BAC86774.1| 453|Homo sapiens protein ( Homo sapiens
cDNA FLJ45032 fis, clone BRAWH3018969. ).
Length = 453
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2
Query: 266 FKFWKVSHLPRVNCTHFVFFNFLCFLGREPYIEAYTTA*YNKIVSYVVL 120
F+ WKV L + H FF + EPY+ ++ A Y+ + +Y+++
Sbjct: 82 FQLWKVVVLAFLALAHSSFFTMFFLVAEEPYL--FSLAAYSCLGAYIIM 128
>AK001056-1|BAA91484.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ10194 fis, clone HEMBA1004768. ).
Length = 122
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 463 LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRNITVVVDG 615
L +S+D K+FD+ HR +L L I K I + + ++++G
Sbjct: 26 LIISIDAGKSFDKTQHRFMLKMLNKLSIEATYLKIIRAICEKSRADIILNG 76
>BX537537-1|CAD97777.1| 1142|Homo sapiens hypothetical protein
protein.
Length = 1142
Score = 29.9 bits (64), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 93 NDTGNGCVT*YHVRNNFIVSCC 158
N N C++ +H NNFI++CC
Sbjct: 211 NLCSNACLSKFHSANNFIMNCC 232
>BC037313-1|AAH37313.1| 902|Homo sapiens ZMYM1 protein protein.
Length = 902
Score = 29.9 bits (64), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 93 NDTGNGCVT*YHVRNNFIVSCC 158
N N C++ +H NNFI++CC
Sbjct: 211 NLCSNACLSKFHSANNFIMNCC 232
>AL607089-7|CAI12903.1| 1067|Homo sapiens zinc finger, MYM-type 1
protein.
Length = 1067
Score = 29.9 bits (64), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 93 NDTGNGCVT*YHVRNNFIVSCC 158
N N C++ +H NNFI++CC
Sbjct: 136 NLCSNACLSKFHSANNFIMNCC 157
>AL607089-6|CAI12902.1| 1142|Homo sapiens zinc finger, MYM-type 1
protein.
Length = 1142
Score = 29.9 bits (64), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 93 NDTGNGCVT*YHVRNNFIVSCC 158
N N C++ +H NNFI++CC
Sbjct: 211 NLCSNACLSKFHSANNFIMNCC 232
>AL607089-5|CAI12901.1| 462|Homo sapiens zinc finger, MYM-type 1
protein.
Length = 462
Score = 29.9 bits (64), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 93 NDTGNGCVT*YHVRNNFIVSCC 158
N N C++ +H NNFI++CC
Sbjct: 211 NLCSNACLSKFHSANNFIMNCC 232
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,669,756
Number of Sequences: 237096
Number of extensions: 2260173
Number of successful extensions: 5661
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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