Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30984
(409 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 116 7e-27
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 116 7e-27
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 116 7e-27
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 109 6e-25
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 99 1e-21
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 99 1e-21
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 89 2e-18
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 80 7e-16
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 33 0.060
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 33 0.060
U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine rece... 32 0.18
AF125952-3|AAD14699.1| 475|Caenorhabditis elegans Hypothetical ... 29 0.98
AC006722-9|ABP57813.1| 475|Caenorhabditis elegans Hypothetical ... 29 0.98
AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical... 28 3.0
AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical... 28 3.0
AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial... 28 3.0
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 27 3.9
AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine re... 27 5.2
Z78414-3|CAD60425.1| 309|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical ... 27 6.9
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 27 6.9
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 27 6.9
Z83238-3|CAB05794.1| 329|Caenorhabditis elegans Hypothetical pr... 26 9.1
U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical p... 26 9.1
AF016450-5|AAB65984.2| 280|Caenorhabditis elegans Serpentine re... 26 9.1
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 116 bits (279), Expect = 7e-27
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = +3
Query: 6 GLYVPFVYLTDAAKVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCL 185
G Y+P ++L D ++ ++ S A FL+ I G+ NT GR+ GW+ D + +L +NN+ L
Sbjct: 526 GFYIPIMFLKDLSESMKLDMSLAMFLVPIFGVFNTIGRVFFGWLTDQKILSALTINNLSL 585
Query: 186 VIATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILF 365
+++ + PL T+ + AI FG IS YI LTSI+L DL+GLE LTN+FGLL++
Sbjct: 586 IVSGLLTLACPLLTSIAGQYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSFGLLVVA 645
Query: 366 RGAAAHGGLP 395
RG A+ G P
Sbjct: 646 RGIASLVGPP 655
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 116 bits (279), Expect = 7e-27
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = +3
Query: 6 GLYVPFVYLTDAAKVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCL 185
G Y+P ++L D ++ ++ S A FL+ I G+ NT GR+ GW+ D + +L +NN+ L
Sbjct: 471 GFYIPIMFLKDLSESMKLDMSLAMFLVPIFGVFNTIGRVFFGWLTDQKILSALTINNLSL 530
Query: 186 VIATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILF 365
+++ + PL T+ + AI FG IS YI LTSI+L DL+GLE LTN+FGLL++
Sbjct: 531 IVSGLLTLACPLLTSIAGQYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSFGLLVVA 590
Query: 366 RGAAAHGGLP 395
RG A+ G P
Sbjct: 591 RGIASLVGPP 600
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 116 bits (279), Expect = 7e-27
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = +3
Query: 6 GLYVPFVYLTDAAKVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCL 185
G Y+P ++L D ++ ++ S A FL+ I G+ NT GR+ GW+ D + +L +NN+ L
Sbjct: 526 GFYIPIMFLKDLSESMKLDMSLAMFLVPIFGVFNTIGRVFFGWLTDQKILSALTINNLSL 585
Query: 186 VIATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILF 365
+++ + PL T+ + AI FG IS YI LTSI+L DL+GLE LTN+FGLL++
Sbjct: 586 IVSGLLTLACPLLTSIAGQYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSFGLLVVA 645
Query: 366 RGAAAHGGLP 395
RG A+ G P
Sbjct: 646 RGIASLVGPP 655
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 109 bits (263), Expect = 6e-25
Identities = 53/129 (41%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 YVPFVYLTDAA-KVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCLV 188
YVPF+YL + K+ G+ ++ SF +S+IG+ N RI CG +AD P + +L +NN L+
Sbjct: 402 YVPFIYLGNHLDKIEGLTTAEKSFTVSLIGVLNIVARIGCGILADRPEVSALAVNNFALI 461
Query: 189 IATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFR 368
A ++ PL T Y ++ + F I ++ + +L SII+V+L+GLEKL+NAFG+L+ F
Sbjct: 462 AAGLATMTVPLYTAYWQFLAFCVPFSIGVACFAALRSIIVVELIGLEKLSNAFGILLTFM 521
Query: 369 GAAAHGGLP 395
G A G P
Sbjct: 522 GVGAVVGSP 530
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 99.1 bits (236), Expect = 1e-21
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 VPFVYLTDAAKVNGIEPSQASFLL--SIIGITNTFGRIICGWVADFPWMDSLMLNNVCLV 188
VPFVYL A K + + A L ++IG N RI CG VAD P M +L ++NV +
Sbjct: 384 VPFVYLALAMKQKNPDFTDAELSLPVTLIGAFNIMFRIGCGMVADHPKMSALQVSNVATI 443
Query: 189 IATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFR 368
IA S+ P CT YVV I F ++ + +L S+I V+L+G+EKL+NAFG+L++F
Sbjct: 444 IAGTSMLFVPFCTELWHYVVFCIPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFM 503
Query: 369 GAAAHGGLP 395
G A G P
Sbjct: 504 GIGAVVGGP 512
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 99.1 bits (236), Expect = 1e-21
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 VPFVYLTDAAKVNGIEPSQASFLL--SIIGITNTFGRIICGWVADFPWMDSLMLNNVCLV 188
VPFVYL A K + + A L ++IG N RI CG VAD P M +L ++NV +
Sbjct: 357 VPFVYLALAMKQKNPDFTDAELSLPVTLIGAFNIMFRIGCGMVADHPKMSALQVSNVATI 416
Query: 189 IATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFR 368
IA S+ P CT YVV I F ++ + +L S+I V+L+G+EKL+NAFG+L++F
Sbjct: 417 IAGTSMLFVPFCTELWHYVVFCIPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFM 476
Query: 369 GAAAHGGLP 395
G A G P
Sbjct: 477 GIGAVVGGP 485
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 88.6 bits (210), Expect = 2e-18
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Frame = +3
Query: 6 GLYVPFVYLTDAAKVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPW----------- 152
G P +L A G+EP Q S +LS G++NT GRII G VAD
Sbjct: 405 GFNSPLYFLPLHATKIGLEPIQGSKVLSAFGVSNTVGRIIFGVVADHKLPLPGGIGNDTA 464
Query: 153 MDSLMLNNVCLVIATVSVGVTPLCTTYSAYVVIAI---TFGIAISGYISLTSIILVDLLG 323
+ L + N+ L I + +T C ++ ++ +A FG +I+ YI LTS+ILVDLLG
Sbjct: 465 RNRLWMYNISLTICGL---LTVFCYQFNGFIPLATYSALFGFSIASYICLTSVILVDLLG 521
Query: 324 LEKLTNAFGLLILFRGAAAHGGLP 395
L+KLTNAFGLL+L++G G P
Sbjct: 522 LDKLTNAFGLLLLWQGVGTVFGPP 545
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 79.8 bits (188), Expect = 7e-16
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 11/108 (10%)
Frame = +3
Query: 81 LLSIIGITNTFGRIICGWVAD--FPWM----DSLMLNNVCL--VIATVSVGVTPLCTTYS 236
+LS+ G NT GR+I G VAD P D N + + + T+ VT C +
Sbjct: 389 ILSVYGTANTIGRLIFGVVADQKLPLPAGLGDDTARNRLWMYNISLTICGIVTAFCYKFD 448
Query: 237 AYVVI---AITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFRG 371
Y+++ A+ FG I+ Y+ LTS+ILVDLLGL+KLTNAFGLL+L++G
Sbjct: 449 GYILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKLTNAFGLLLLWQG 496
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 33.5 bits (73), Expect = 0.060
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +3
Query: 15 VPFVYLTDAAKVNGIEPSQ-ASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCLVI 191
V F+Y+ + + E + L G+T+ G+ + +V + + ++ + VI
Sbjct: 251 VMFIYIANILILMESENIEDKEILYGYQGLTSIAGKFVLTFVMSLNKVHNGIIMILSYVI 310
Query: 192 ATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFRG 371
A +S+ C + + + GI I Y + + LV L+G +L A G L G
Sbjct: 311 AQLSLSAAAFCYKFWQFRLQNAFAGIGIGLYQACLAPFLVALVGPSQLAYALGFTNLING 370
Query: 372 AAAHGGL 392
+ G+
Sbjct: 371 VSIISGV 377
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 33.5 bits (73), Expect = 0.060
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +3
Query: 15 VPFVYLTDAAKVNGIEPSQ-ASFLLSIIGITNTFGRIICGWVADFPWMDSLMLNNVCLVI 191
V F+Y+ + + E + L G+T+ G+ + +V + + ++ + VI
Sbjct: 251 VMFIYIANILILMESENIEDKEILYGYQGLTSIAGKFVLTFVMSLNKVHNGIIMILSYVI 310
Query: 192 ATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLLILFRG 371
A +S+ C + + + GI I Y + + LV L+G +L A G L G
Sbjct: 311 AQLSLSAAAFCYKFWQFRLQNAFAGIGIGLYQACLAPFLVALVGPSQLAYALGFTNLING 370
Query: 372 AAAHGGL 392
+ G+
Sbjct: 371 VSIISGV 377
>U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine
receptor, class i protein50 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.18
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +3
Query: 27 YLTDAAKVNGIEPSQASFLLSIIGITNTFGRIICGWVADFPWMDS-LMLNNVCLVIATV- 200
Y+++ +K+N Q SF GI TFG ++ + +F D LML V L ++
Sbjct: 172 YISEFSKLNNFAIYQWSFWFIFSGIVATFGIVLYCIICNFATYDMLLMLKEVQLKVSNQN 231
Query: 201 -----SVGVTPLCTTYSAYVVIAITFGIAISGYISL 293
SV T + + + V++ F + + G + L
Sbjct: 232 YKRHRSVLTTLIAQSLGSSVIVVPGFALMVFGLLEL 267
>AF125952-3|AAD14699.1| 475|Caenorhabditis elegans Hypothetical
protein C01B4.7 protein.
Length = 475
Score = 29.5 bits (63), Expect = 0.98
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +3
Query: 87 SIIGITNTFGRIICGWVADFPWMDSLMLN---NVCLVIATVSVGVTPLCTTYSAYVVI-- 251
SI+ G ++ + P ++SL + + C + +T+ TPL TYS Y+V+
Sbjct: 91 SILFSATAIGALVA-LIPSVPILNSLGVRLTLSFCGLCSTLGTFFTPLAVTYSFYLVVFC 149
Query: 252 AITFGIAISGYISLTSII 305
+ GI IS +++ +I
Sbjct: 150 RVLQGIGISVILTVLGVI 167
>AC006722-9|ABP57813.1| 475|Caenorhabditis elegans Hypothetical
protein Y19D10A.4 protein.
Length = 475
Score = 29.5 bits (63), Expect = 0.98
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +3
Query: 87 SIIGITNTFGRIICGWVADFPWMDSLMLN---NVCLVIATVSVGVTPLCTTYSAYVVI-- 251
SI+ G ++ + P ++SL + + C + +T+ TPL TYS Y+V+
Sbjct: 91 SILFSATAIGALVA-LIPSVPILNSLGVRLTLSFCGLCSTLGTFFTPLAVTYSFYLVVFC 149
Query: 252 AITFGIAISGYISLTSII 305
+ GI IS +++ +I
Sbjct: 150 RVLQGIGISVILTVLGVI 167
>AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 RYNEYVRPYHMRVGRRLPLDGLLDAEQRVPGHCHGFCRRNAPVHHVQCLRSDCY--NFWD 268
R +YV + + G R PL + ++E RV F P HV SD Y N
Sbjct: 90 RIVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEH 149
Query: 269 CYFRLHLADVDH 304
C R H + H
Sbjct: 150 C-LRAHTSAHQH 160
>AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 RYNEYVRPYHMRVGRRLPLDGLLDAEQRVPGHCHGFCRRNAPVHHVQCLRSDCY--NFWD 268
R +YV + + G R PL + ++E RV F P HV SD Y N
Sbjct: 90 RIVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEH 149
Query: 269 CYFRLHLADVDH 304
C R H + H
Sbjct: 150 C-LRAHTSAHQH 160
>AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial
phenylalanyl-tRNAsynthetase protein.
Length = 458
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 RYNEYVRPYHMRVGRRLPLDGLLDAEQRVPGHCHGFCRRNAPVHHVQCLRSDCY--NFWD 268
R +YV + + G R PL + ++E RV F P HV SD Y N
Sbjct: 90 RIVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEH 149
Query: 269 CYFRLHLADVDH 304
C R H + H
Sbjct: 150 C-LRAHTSAHQH 160
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +3
Query: 177 VCLVIATVSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSIILVDLLGLEKLTNAFGLL 356
V +VIA + + P+C+ + A +I FG+ GY++L + L D + + + + G
Sbjct: 716 VMIVIAVLFIP-QPMCSLWVALACASIDFGVI--GYMTLWGVNL-DAISMITIIMSIGFS 771
Query: 357 ILFRGAAAHG 386
+ + A+G
Sbjct: 772 VDYSAHIAYG 781
>AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine
receptor, class u protein27 protein.
Length = 336
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 150 WMDSLMLNNVCLVIATVSVGVTPLCTTYS-----AYVVIAITFGIAISGYISLTSIILVD 314
W+ + ++NN L++ + T T S A V + +T I Y+S + I++
Sbjct: 216 WLSASLINNSVLLVKLAHLKSTTAAHTRSQKSHKAEVSLTVTTVSMICSYLSNSMIVIAA 275
Query: 315 LLGLE 329
LG+E
Sbjct: 276 QLGIE 280
>Z78414-3|CAD60425.1| 309|Caenorhabditis elegans Hypothetical
protein W09D12.3 protein.
Length = 309
Score = 26.6 bits (56), Expect = 6.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 162 LMLNNVCLVIAT-VSVGVTPLCTTYSAYVVIAITFGIAISGYISLTSI 302
LM N+ L+IAT V + P T IA+TF + GY ++ I
Sbjct: 223 LMSGNLLLLIATSVMYVICPFRTVIMKIQTIAVTFTSDMVGYTNINLI 270
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 275 NSNPKSYSNHYVG--TVRGAQGRYADRNRGNDQAHVVQHQGVHPGEVCD 135
N N + Y+G + QG+Y D N+G Q Q+Q ++ G D
Sbjct: 227 NQNQNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVD 275
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 275 NSNPKSYSNHYVG--TVRGAQGRYADRNRGNDQAHVVQHQGVHPGEVCD 135
N N + Y+G + QG+Y D N+G Q Q+Q ++ G D
Sbjct: 222 NQNQNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVD 270
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 275 NSNPKSYSNHYVG--TVRGAQGRYADRNRGNDQAHVVQHQGVHPGEVCD 135
N N + Y+G + QG+Y D N+G Q Q+Q ++ G D
Sbjct: 245 NQNQNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVD 293
>AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical
protein T01G6.5 protein.
Length = 383
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -1
Query: 391 SPPWAAAPRNR---ISSPNAFVSFSSPSRSTRMIDVSEM 284
SPP AA P++ +S P+ + + PS++ IDVS +
Sbjct: 77 SPPPAAIPQSLEVFVSRPSMILFANKPSQTRNFIDVSNL 115
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/53 (20%), Positives = 24/53 (45%)
Frame = +3
Query: 132 WVADFPWMDSLMLNNVCLVIATVSVGVTPLCTTYSAYVVIAITFGIAISGYIS 290
W+ + P M L + V + ++ + +TPL ++ + I+G I+
Sbjct: 103 WIGELPMMALLAICRVLIFANSMEIRITPLVVKMIVVCIVCWVLFVFIAGCIT 155
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -1
Query: 211 TPTETVAMTRHTLFSIKESIQGKSATHPHMIRPNVFVIP-IIDSRNDACDGSMPLTLAAS 35
TP+ + R + + K+S + T PH P + +P S D D + P+ ++
Sbjct: 33 TPSSSSTRRRMSRINFKKSSASTTPTSPHCPSPRLISLPRCASSSIDRKDQASPMASPST 92
Query: 34 VRYTK 20
Y K
Sbjct: 93 PLYPK 97
>Z83238-3|CAB05794.1| 329|Caenorhabditis elegans Hypothetical
protein T08G3.3 protein.
Length = 329
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 TVASIVPAVYNRYNEYVRPYHMRVGRRL 145
T+ +++ NRYN VR HM GR++
Sbjct: 109 TIPAMIMFFENRYNYLVRKDHMTRGRKI 136
>U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical
protein K09C4.1a protein.
Length = 520
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 223 HRGVTPTETVAMTRHTLFSIKESIQGKSATHPHMIRPNVFVIPIIDSR 80
H G+TPTET +++F++ A +F++P+ DSR
Sbjct: 48 HFGITPTETSVGVLNSIFAVTHETGNALAI--------IFLLPVADSR 87
>AF016450-5|AAB65984.2| 280|Caenorhabditis elegans Serpentine
receptor, class t protein68 protein.
Length = 280
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/53 (20%), Positives = 23/53 (43%)
Frame = +3
Query: 132 WVADFPWMDSLMLNNVCLVIATVSVGVTPLCTTYSAYVVIAITFGIAISGYIS 290
W+ D P M L ++ V + T+ P+ S +++ + + G I+
Sbjct: 103 WIGDLPMMSLLSVSRVLIFTNTIKTSKFPIFVKLSVVCILSWVVYVFLYGCIT 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,104,194
Number of Sequences: 27780
Number of extensions: 190834
Number of successful extensions: 599
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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