Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30976
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 60 3e-10
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 51 1e-07
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 45 7e-06
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 43 3e-05
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 42 9e-05
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 40 3e-04
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 40 3e-04
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 40 3e-04
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 40 4e-04
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 37 0.002
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.006
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 35 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.010
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 34 0.017
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 33 0.030
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 32 0.053
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 30 0.21
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 27 2.6
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 26 3.5
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 3.5
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 26 3.5
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 26 3.5
SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomy... 25 8.1
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 25 8.1
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 59.7 bits (138), Expect = 3e-10
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Frame = +2
Query: 119 AMETNLSQKVSCTVNFAYDASEADELTIRPGDVIRDVERLPGGWWRGE-LRGNRGMFPDN 295
A E K V + Y E +E+ + + I+ +E + GWW GE +G +G+FP N
Sbjct: 719 ATEHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSN 778
Query: 296 FVSLLNEHATTRS------TGVQGR-CRALYSYQPVNPXXXXXXXXXXXXXXXXXXXXWW 454
+V + + T + G G+ +A+Y YQ WW
Sbjct: 779 YVEITGPNETANNPPAEPQAGGPGKSVKAIYDYQAQEDNELSFFEDEIIANVDCVDPNWW 838
Query: 455 QXPRQGRVGVFPSNFV 502
+ G G+FPSN+V
Sbjct: 839 EGECHGHRGLFPSNYV 854
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFVSLLNEHA 322
+ + +A +L G+VI +E + WWRGEL G G+FP N+V LL + A
Sbjct: 149 YDFPGPDAGDLGFHAGEVIIVLEHVNNDWWRGELNGKEGIFPSNYVRLLEDSA 201
Score = 31.9 bits (69), Expect = 0.070
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 449 WWQXPRQGRVGVFPSNFVVMLD 514
WW+ G+ G+FPSN+V +L+
Sbjct: 177 WWRGELNGKEGIFPSNYVRLLE 198
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 45.2 bits (102), Expect = 7e-06
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRG----NRGMFPDNFV 301
+ YDA+ +E++ R GD I ++ GWW G + G NRG FP NFV
Sbjct: 616 YDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFV 665
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 125 ETNLSQKVSCTVN-----FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFP 289
E+NL+ + TV+ + + A+E EL+ + GD+I +E + WW+G + G+FP
Sbjct: 206 ESNLATSPASTVSRVRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFP 265
Query: 290 DNFVSLLNE 316
N+V + E
Sbjct: 266 VNYVQRVVE 274
Score = 28.3 bits (60), Expect = 0.87
Identities = 14/59 (23%), Positives = 19/59 (32%)
Frame = +2
Query: 326 TRSTGVQGRCRALYSYQPVNPXXXXXXXXXXXXXXXXXXXXWWQXPRQGRVGVFPSNFV 502
T R RALY + WW+ + VG+FP N+V
Sbjct: 211 TSPASTVSRVRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFPVNYV 269
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 41.5 bits (93), Expect = 9e-05
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPG-GWWRGELRGNRGMFPDNFVS 304
+AY A EL+I+ GD+I+ R G GW G L G G FP N+V+
Sbjct: 593 YAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYVT 640
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 167 AYDASEADELTIRPGD---VIRDVERLPGGWWRGE-LRGNRGMFPDNFVSLLNEHATTRS 334
++ +DEL + G +I+ E GWW GE +GNRG+FP + V L+++ + S
Sbjct: 12 SFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASHVELISDERSDSS 71
Query: 335 TGVQGR 352
+G+
Sbjct: 72 DSRRGK 77
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +2
Query: 131 NLSQKVSCTVNFAYDASEADELTIRPGDVIRDVERLPGGWWRGE-------LRGNRGMFP 289
++S + + ++++ +EL ++ GD++ ++ + GWW GE GN GMFP
Sbjct: 419 SISSRKVVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFP 478
Query: 290 DNF 298
N+
Sbjct: 479 SNY 481
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +2
Query: 302 SLLNEHATTRSTGVQGR--CRALYSYQPVNPXXXXXXXXXXXXXXXXXXXXWWQXPRQGR 475
S LN ++ + R R YS++P WW + G
Sbjct: 407 SKLNRSYSSPLASISSRKVVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGE 466
Query: 476 VGVFPSN 496
GVF N
Sbjct: 467 DGVFTGN 473
Score = 21.0 bits (42), Expect(2) = 7.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 470 GRVGVFPSNFVV 505
G G+FPSN+ V
Sbjct: 472 GNTGMFPSNYCV 483
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 39.9 bits (89), Expect = 3e-04
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGG--WWRGELRGNRGMFPDNFVSL 307
+ Y A A +L+ GD I V R WW G L G +G FP N+V L
Sbjct: 416 YDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYVQL 465
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRGEL----RGNRGMFPDNFV 301
+ Y A +E++ + GD + + GWW GE+ RG+FP NFV
Sbjct: 875 YDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNFV 924
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPG--GWWRGELRGNRGMFPDNFVSL 307
+++ + +L+ + GD+I VER WW G + G+FP N+V L
Sbjct: 380 YSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYVKL 429
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 125 ETNLSQKVSCTVNFAYDASEADELTIRPG-DVIRDVERLPGGWWRGELRGNRGMFPDNFV 301
+++ QK+ TV + + A ADELT++ V+ + WW+ + G G+ P NF+
Sbjct: 505 DSSAGQKMG-TVLYDFIAEAADELTVKANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFI 563
Score = 27.9 bits (59), Expect = 1.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 449 WWQXPRQGRVGVFPSNFV 502
WW+ G+ GV PSNF+
Sbjct: 546 WWKCSVDGKEGVVPSNFI 563
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 35.1 bits (77), Expect = 0.008
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 188 DELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFVS 304
+E+TI+ ++I V++ P GWW G G P +V+
Sbjct: 1123 NEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYVT 1161
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.010
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRG---ELRGNR--GMFPDNF 298
+ Y +S +D+L PG VI V L G W+ G + GNR G FP +F
Sbjct: 12 YPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSFPKDF 61
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 33.9 bits (74), Expect = 0.017
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRG----ELRGNRGMFPDNFVSLL 310
+AY A+ E+ + D + + R GWW+G G G+FP N++ L
Sbjct: 361 YAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEEL 413
Score = 33.5 bits (73), Expect = 0.023
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 356 RALYSYQPVNPXXXXXXXXXXXXXXXXXXXXWWQX----PRQGRVGVFPSNFVVMLD 514
RALY+Y+ P WW+ P GR+G+FPSN++ L+
Sbjct: 358 RALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEELE 414
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 33.1 bits (72), Expect = 0.030
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 131 NLSQKVSCTVN--FAYDASEADELTIRPGDVIRDVERLPGGWWRG-ELRGN-RGMFPDNF 298
++ +++ C V +A+ +L GD+I + G WW G + N +G+FP NF
Sbjct: 2 SIPKQLPCMVRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNF 61
Query: 299 VSLLN 313
V L+
Sbjct: 62 VHCLD 66
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 32.3 bits (70), Expect = 0.053
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +2
Query: 164 FAYDASEADELTIRPGDVIRDVERLPGGWWRG-------ELRGNRGMFPDNF 298
+++ EL + GDVI+ E+L W+ G E GN GMFP N+
Sbjct: 288 YSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFPVNY 339
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 279 PRFPRNSPRHQPPGNLSTSRITSPGLIVSSSASDASYAKLTVQ 151
P PR P H+PP + +T + S+S + YA ++ Q
Sbjct: 630 PPTPRTKPSHKPPVSYKNKLVTQSAIGRSTSVREGRYAGISSQ 672
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 173 DASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFV 301
++S L GD I +E L GW G RG FP + +
Sbjct: 13 NSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSEKRGWFPTSCI 55
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 45 SELKCAICGSMK*KIRDVVISVQCRQWRQIYHK 143
S + C CGS + RD + V+C +I H+
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHR 146
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 348 PCTPVDLVVACSFRRETKLSGNMPRFPRNSPRHQPPGNLSTSRITSPGLIVSSSA 184
P P V+ ++ + +LS + FP S P N+ T+ T+ S+A
Sbjct: 315 PSQPSKTNVSAAYEKPAELSSSSVPFPHKSQDSATPANVETTPSTATSAPKKSTA 369
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 ETKLSGNMPRFPRNSPRHQ-PPGNLSTSRITSPGLIVSSSASDASYAKL 160
E+ LS P +N R P LS S ++SP + +SAS +++ L
Sbjct: 66 ESPLSKRNPTIKQNRVRFDLPDDELSRSNVSSPEKTLLTSASTSTFDSL 114
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 279 PRFPRNSPRHQPPGNLSTSRITSPGLIVSSSASDASYA 166
PR P S R Q GN + + + G I SSA+ +YA
Sbjct: 42 PRMPPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYA 79
>SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 410
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 353 TALARPLIS**HVRLEEKRSCPGTCRG 273
T+LARP+I+ +++ EK +C G
Sbjct: 92 TSLARPIIARRQIQIAEKENCIAVSHG 118
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 129 QIYHKKCLAPLTS 167
++YH +CL+PLTS
Sbjct: 192 ELYHLQCLSPLTS 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,155,483
Number of Sequences: 5004
Number of extensions: 39489
Number of successful extensions: 134
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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