Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30973
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0240 + 15958110-15958305,15959586-15960763 41 0.001
09_04_0421 + 17417851-17418840 33 0.19
09_04_0411 + 17366559-17367497 33 0.19
02_05_0955 - 33056171-33057256 33 0.19
07_01_0448 - 3383706-3384761 33 0.25
07_03_1465 - 26729872-26730909 33 0.33
09_04_0410 + 17362751-17363698 32 0.43
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 32 0.43
08_02_0996 - 23404595-23405596 32 0.57
08_02_0997 + 23409932-23410894 31 0.76
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 31 0.76
09_04_0412 + 17369935-17370873 31 1.0
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 31 1.0
09_04_0417 + 17404433-17405392 31 1.3
07_03_1467 - 26736859-26736868,26737769-26738439 31 1.3
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 31 1.3
03_02_0423 + 8321076-8322164 31 1.3
04_04_0052 + 22386553-22387506 30 1.7
01_01_0370 + 2895685-2895717,2895892-2896944 30 1.7
09_04_0378 - 17091407-17092369 30 2.3
09_04_0239 + 15954995-15956242 30 2.3
05_04_0279 + 19724662-19724700,19725344-19726369 30 2.3
01_01_0379 - 2956396-2957409 30 2.3
01_01_0378 - 2953514-2954341,2954388-2954504 30 2.3
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 29 3.1
07_01_0447 - 3377666-3378673 29 3.1
07_01_0445 - 3365244-3366227 29 3.1
03_06_0249 + 32638112-32639140 29 3.1
07_01_0446 - 3371829-3372132,3374691-3375673 29 4.0
06_01_0780 + 5824367-5825335 29 4.0
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 29 4.0
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 5.3
07_03_1469 - 26742772-26743848 29 5.3
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 7.1
07_03_0503 + 18839863-18841209 28 7.1
09_04_0414 - 17393780-17394826 28 9.3
07_01_0449 - 3392512-3393504 28 9.3
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921... 28 9.3
04_04_1166 - 31427523-31428154,31428888-31429020 28 9.3
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Frame = +1
Query: 229 PPLGSLRFKAPQSPE-PWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTP---- 393
P S RF AP+ W RD T GN A D V + DE + + V+ P
Sbjct: 52 PKAHSDRFGAPERVGGSWCATRDKTRSGNGVATKDVV-----IDDETGVSVRVFLPVDAA 106
Query: 394 ---STDGAFLPVMIWIHGGGFKWGSGNTNL---YGPDFLVDRDVVVMTINYR 531
+ G LP+++++HGG F GS + + Y VV++++YR
Sbjct: 107 AAAAAAGRRLPLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYR 158
>09_04_0421 + 17417851-17418840
Length = 329
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = +1
Query: 382 VYTPSTD----GAFLPVMIWIHGGGFKWGS---GNTNLYGPDFLVDRDVVVMTINYR 531
+Y PST G LPV+++ HGGGF GS T+ + V+V+++ YR
Sbjct: 65 IYLPSTPASGYGRRLPVLVFFHGGGFCLGSAFDAATHGHANRLAARAGVIVVSVEYR 121
>09_04_0411 + 17366559-17367497
Length = 312
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 334 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGFKWGSGNTNLYG---PDF 489
V +K V D LF+ V+ P G LPV+++ HGGGF S ++ Y
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQETGKKLPVLVYFHGGGFIIESADSATYHNYLNSV 101
Query: 490 LVDRDVVVMTINYR 531
V+V+++NYR
Sbjct: 102 AAAAGVLVVSVNYR 115
>02_05_0955 - 33056171-33057256
Length = 361
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 400 DGAFLPVMIWIHGGGFKWGSGNTNL---YGPDFLVDRDVVVMTINYR 531
DG LP+++++HGG F GS + + Y VV++++YR
Sbjct: 86 DGRRLPLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYR 132
>07_01_0448 - 3383706-3384761
Length = 351
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 403 GAFLPVMIWIHGGGFKWGS---GNTNLYGPDFLVDRDVVVMTINYR 531
G LPV+++ HGGGF GS N + + D VV++ YR
Sbjct: 88 GGKLPVLVYFHGGGFCLGSCTWANVHSFCLRLAADAGAVVLSAGYR 133
>07_03_1465 - 26729872-26730909
Length = 345
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Frame = +1
Query: 370 LFLNVYTPSTDGAF--LPVMIWIHGGGFKWGSGNTNLYGPDFL---VDRDV--VVMTINY 528
L+ V+ P T+ A LPV+++ HGGGF S + Y D L + R V VV+++NY
Sbjct: 74 LWARVFCPPTNTAAVKLPVVVYFHGGGFVLFSAASRPY--DALCRRISRGVGAVVVSVNY 131
Query: 529 R 531
R
Sbjct: 132 R 132
>09_04_0410 + 17362751-17363698
Length = 315
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 412 LPVMIWIHGGGFKWGSGNTNLYG---PDFLVDRDVVVMTINYR 531
LPV+++ HGGGF S +++ Y F VVV++++YR
Sbjct: 74 LPVLVFFHGGGFLIESADSSTYHNYVNPFAAAAGVVVVSVDYR 116
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 575 QGNAG--IKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGA 691
QG G + D Q I +V +NI +GG+ + + G+SAGA
Sbjct: 187 QGTIGDMVSDASQGISYVCNNIASYGGDPNRIYLVGQSAGA 227
>08_02_0996 - 23404595-23405596
Length = 333
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 334 VFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGF 447
V +K V D + L + +Y P G LPV+I+ HGG F
Sbjct: 71 VVSKDVVVDRSTGLAVRLYRPKHRGGRLPVLIYFHGGAF 109
>08_02_0997 + 23409932-23410894
Length = 320
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 370 LFLNVYTPSTDGA---FLPVMIWIHGGGFKWGS 459
L+ +Y P DG LPV++++HGGG GS
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGS 88
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 575 QGNAG--IKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGA 691
QG G ++D Q I +V +NI +GG+ + + G+SAGA
Sbjct: 195 QGTIGDMVEDASQGIAFVCNNIASYGGDPERIYLVGQSAGA 235
>09_04_0412 + 17369935-17370873
Length = 312
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 334 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGFKWGSGNTNLYG---PDF 489
V +K V D LF+ V+ P G LPV+++ HGGGF S ++ Y
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQELGKKLPVLVYFHGGGFIIESADSATYHNYLNSA 101
Query: 490 LVDRDVVVMTINYR 531
V+V++++YR
Sbjct: 102 AAAAGVLVVSVDYR 115
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 412 LPVMIWIHGGGFKWGS---GNTNLYGPDFLVDRDVVVMTINYR 531
LPV+++ HGGGF GS +T+ Y D + + +++ YR
Sbjct: 563 LPVVVYFHGGGFVTGSPARPSTHAYLNDLVARAGAIGVSVYYR 605
>09_04_0417 + 17404433-17405392
Length = 319
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 250 FKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIW 429
F +P +DG T++ V V A+ Y+ D L P LP++++
Sbjct: 27 FGTETTPAGFDGATGVTSKDVVIDDATGVSARLYIPD-----LPASGPGHHRKKLPIVVY 81
Query: 430 IHGGGFKWGSGNTNLYGP--DFLVDR-DVVVMTINYR 531
HGGG S + Y + LV + + +++NYR
Sbjct: 82 FHGGGMVLDSAASPTYHRYLNSLVSKAGALAVSVNYR 118
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Frame = +1
Query: 370 LFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTI 522
L+ V++P++ A LPV+++ HGGGF + ++ Y D L R VV+++
Sbjct: 83 LWARVFSPASSSAVESPPLPVVVYFHGGGFALLTAASSQY--DALCRRLCRELRAVVVSV 140
Query: 523 NYR 531
NYR
Sbjct: 141 NYR 143
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +2
Query: 161 RDGS*TARPGRPSTVSKEYHMRNPHWVLCDLRPHNLQNPGTASGMPRRKGTCVLKSIQSS 340
RDG A PG S S E +N NL + G P +K + ++
Sbjct: 26 RDGGVAASPGSQSAASTERRKKNRG------SKRNLSDGSGEDGRPGKKINLEEEELEEE 79
Query: 341 RNPMSAMKTACS*TCTPL 394
R P+ +ACS +PL
Sbjct: 80 RMPLEDEASACSSCSSPL 97
>03_02_0423 + 8321076-8322164
Length = 362
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +1
Query: 334 VFAKSYVGDENC-LFLNVYTPSTDGAF--LPVMIWIHGGGFKWGSGNTNLYGPDFLVD-- 498
V A+ V D ++ +Y P+ A +PV+++ HGGGF GS + Y +FL
Sbjct: 73 VIARDAVVDRATRVWARLYAPAAAAAAGRVPVVVYFHGGGFCVGSAAWSCY-HEFLAKLA 131
Query: 499 --RDVVVMTINYR 531
VM+++YR
Sbjct: 132 ARAGCAVMSVDYR 144
>04_04_0052 + 22386553-22387506
Length = 317
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 403 GAFLPVMIWIHGGGFKWGSGNTNLYG---PDFLVDRDVVVMTINYR 531
G LPV+++ HGGGF GS + Y D V ++++YR
Sbjct: 73 GERLPVVVYFHGGGFVIGSAASPAYHRCLNDLAAACPAVAVSVDYR 118
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 400 DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRD---VVVMTINYR 531
DG LPV+++ HGGG+ G+ + + + L D VV+++ YR
Sbjct: 98 DGGKLPVLVYFHGGGYCIGALDQSPFHTFCLRAADELPAVVLSVQYR 144
>09_04_0378 - 17091407-17092369
Length = 320
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 400 DGAFLPVMIWIHGGGFKWGSGN---TNLYGPDFLVDRDVVVMTINYR 531
DG LP++++ H G F GS + + Y + VV + +NYR
Sbjct: 72 DGKKLPILLFFHAGYFVVGSASWPPVHRYTNSVVASARVVAVAVNYR 118
>09_04_0239 + 15954995-15956242
Length = 415
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 403 GAFLPVMIWIHGGGFKWGSGNT---NLYGPDFLVDRDVVVMTINYR 531
G LP+++++HGG F GS + + Y VV++++YR
Sbjct: 91 GRRLPLVVYVHGGAFCSGSASAPPFHRYAESLAARAAAVVVSVDYR 136
>05_04_0279 + 19724662-19724700,19725344-19726369
Length = 354
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +1
Query: 415 PVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-----VVMTINYR 531
PV+I+ HGG F S ++ +Y D L R V VV+++NYR
Sbjct: 114 PVIIFFHGGSFVHSSASSTIY--DSLCRRFVKLSKGVVVSVNYR 155
>01_01_0379 - 2956396-2957409
Length = 337
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 370 LFLNVYTPST--DGAFLPVMIWIHGGGFKWGS 459
L L VY P T D LPV++ HGGG+ G+
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLGT 95
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Frame = +1
Query: 256 APQSPEPWDGIRDATAEGNVCAQIDPVFAKSY---VGDE-NCLFLNVYTPST-------- 399
AP E + G+ ++G+V + V S+ V D + L + VYT T
Sbjct: 9 APHVVEDFYGVVKLLSDGSVVRGDESVLIPSWKDVVYDATHGLRVRVYTSRTAAAAAAGD 68
Query: 400 DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFL---VDRDVVVMTINYR 531
DG LPV+++ HGGG+ G+ + ++ L + VV+++ YR
Sbjct: 69 DGGKLPVLVYFHGGGYCIGALDQSICHGFCLRAAYELPAVVLSVQYR 115
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 211 GIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGN-VCAQIDPVFAKSY 351
G+P A + SL PQ+ E W+ RD+ E + + ++ + + SY
Sbjct: 382 GLPLAIITMASLLVNKPQTKEQWEKYRDSIVENDPIVNRMQKILSLSY 429
>07_01_0447 - 3377666-3378673
Length = 335
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 PVFAKSYVGDENC-LFLNVYTPSTDGAF---LPVMIWIHGGGF 447
PV K V D L L +Y P+ G LPV+++ HGGGF
Sbjct: 49 PVQWKDVVYDAGRGLRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>07_01_0445 - 3365244-3366227
Length = 327
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 394 STDGAFLPVMIWIHGGGFKWGSG---NTNLYGPDFLVDRDVVVMTINYR 531
+ + A +PV+ + HGGGF GSG N + + + VV++ +YR
Sbjct: 70 AANDARVPVVAYFHGGGFCIGSGRWPNFHAWCLRLAAELPAVVLSFDYR 118
>03_06_0249 + 32638112-32639140
Length = 342
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 370 LFLNVYTP---STDGAFLPVMIWIHGGGFKWGS 459
L L VY P + G LPV+++ HGGG+ GS
Sbjct: 60 LKLRVYRPPAATVAGEKLPVLVYFHGGGYFIGS 92
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 370 LFLNVYTPSTDGAF---LPVMIWIHGGGFKWGS 459
L + +Y P+ G LPV+++ HGGGF GS
Sbjct: 64 LGVRMYRPAATGGAEEKLPVVVYFHGGGFCIGS 96
>06_01_0780 + 5824367-5825335
Length = 322
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 370 LFLNVYTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGP--DFLVDR-DVVVMTINYR 531
L + +Y P G LP++++ HGGGF S + Y + L R VV +++ YR
Sbjct: 59 LSVRLYLPPAVAAGERLPILVYFHGGGFMVESATSPTYHRYLNALASRARVVAVSVEYR 117
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Frame = +1
Query: 1 KHLCNELNK---ILINNSGVNNEF---PTMISAVNEFL---DDLRGGRMSESPLVTVEQG 153
K LC EL I++ G+N P + V F+ D L+G RM +SP+ ++
Sbjct: 115 KELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDEA 174
Query: 154 QLQGRIVNSPSG 189
G SP G
Sbjct: 175 IHHGHTSQSPVG 186
>11_06_0388 + 23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 366 VFIADIGFREDW-IDLSTHVPFRRGIPDAVPGFWRLWGLKSQRTQ 235
V + + F+E+ + + R P+A PG WR+W +RT+
Sbjct: 1052 VILGMVSFQEEQSFEPQGMIKVERVEPNAAPGGWRIWPFSFKRTR 1096
>07_03_1469 - 26742772-26743848
Length = 358
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 370 LFLNVYTPSTDG---AFLPVMIWIHGGGFKWGSGNTNLYG---PDFLVDRDVVVMTINYR 531
L+ V+ P+ A +PVM++ HGGGF S + D VVV+++NYR
Sbjct: 87 LWARVFAPAAAAQAAAPMPVMVYYHGGGFALFSPAVAPFDGVCRRLCGDVGVVVVSVNYR 146
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 256 APQSPEPWDGIRDATAEGNVCAQIDPVFAK 345
AP+ P P+DG D + G + ID VF K
Sbjct: 565 APEPPYPFDGETDMSVGGGLAELIDWVFDK 594
>07_03_0503 + 18839863-18841209
Length = 448
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 400 DGAFLPVMIWIHGGGFKWGSGNTNL---YGPDFLVDRDVVVMTINYR 531
+G LP++++ HGG F GS L Y +V+++ YR
Sbjct: 90 EGRRLPLVLYFHGGAFVTGSAFGRLFHRYAASLAARAGALVVSVEYR 136
>09_04_0414 - 17393780-17394826
Length = 348
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 382 VYTPSTDG-AFLPVMIWIHGGGFKWGSGNTNLYGP---DFLVDRDVVVMTINYR 531
+Y PS A +PV+++ HGG F S T +Y V+ +++NYR
Sbjct: 91 LYLPSFRATAKVPVLLYFHGGAFVVESAFTPIYHAYLNTLAAKAGVLAVSVNYR 144
>07_01_0449 - 3392512-3393504
Length = 330
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 370 LFLNVYTP-STDGAFLPVMIWIHGGGFKWGS---GNTNLYGPDFLVDRDVVVMTINYR 531
L + +Y P G LPV + HGGGF GS N Y + VV+ +YR
Sbjct: 54 LGVRLYRPRERGGGRLPVFFYYHGGGFCIGSRTWPNCQNYCLRLAAELGAVVVAPDYR 111
>06_01_1118 -
9213785-9215051,9215811-9215992,9216075-9216611,
9216742-9217224
Length = 822
Score = 27.9 bits (59), Expect = 9.3
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +1
Query: 220 YAKPPLGSLRFK-APQSPE--PWDGIRDATA-EGNVCAQIDPVFAKSYVGDENCLFLNVY 387
Y KP LG ++++ P S + D R ++ G A I A++++ CL V
Sbjct: 104 YGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLTRVA 163
Query: 388 TPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVV 510
P+T ++ +GGG+ + + + P FLV ++V
Sbjct: 164 EPTTSWPSSEHTVYHYGGGYNFTV--LSFWAP-FLVQNELV 201
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 347 DFAKTGSI*AHTFPSAVASLMPSQGSGDCGALNRKEPNGG 228
DFA G HT P A L QG+ G + +P GG
Sbjct: 105 DFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGG 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,370,711
Number of Sequences: 37544
Number of extensions: 632915
Number of successful extensions: 1696
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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