Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30972
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z66520-10|CAA91391.2|  600|Caenorhabditis elegans Hypothetical p...    27   9.4  

>Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical protein
            F11C1.5b protein.
          Length = 1339

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 443  YMRGTHTASNSGVMRCISENENCPIPHIF-PDILACNHV 330
            +++G H+ S SGV+R  SEN     P+ F  D +A N V
Sbjct: 1271 FVQGNHSGSVSGVLRKKSENTFHKRPYSFTDDRIAANDV 1309


>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical protein
            F11C1.5a protein.
          Length = 1804

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 443  YMRGTHTASNSGVMRCISENENCPIPHIF-PDILACNHV 330
            +++G H+ S SGV+R  SEN     P+ F  D +A N V
Sbjct: 1271 FVQGNHSGSVSGVLRKKSENTFHKRPYSFTDDRIAANDV 1309


>Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical
           protein F43A11.3 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 570 LLFLFRVSTDAALDCLLCFSFIFR*IYYIPTSFAFY 677
           ++ +F  ST+     L+CFS  F   Y + +SF FY
Sbjct: 37  IISIFLTSTERTSFNLICFSRAFVNFYILLSSFLFY 72


>Z66520-10|CAA91391.2|  600|Caenorhabditis elegans Hypothetical
           protein F49E12.6 protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 560 VVPKHLTSKMLIFSKKYKFNNN 495
           V PKHL S +L  SKK+K N N
Sbjct: 548 VKPKHLMSNILGESKKFKNNQN 569


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,822,049
Number of Sequences: 27780
Number of extensions: 305818
Number of successful extensions: 530
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)