Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30970
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 476 e-135
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 476 e-135
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 476 e-135
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 94 1e-19
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 91 1e-18
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 90 2e-18
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 73 3e-13
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 56 3e-08
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 29 4.9
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 29 4.9
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 28 6.5
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 476 bits (1174), Expect = e-135
Identities = 229/259 (88%), Positives = 246/259 (94%)
Frame = +2
Query: 2 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 181
IDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTG
Sbjct: 116 IDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTG 175
Query: 182 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSA 361
KTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSA
Sbjct: 176 KTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSA 235
Query: 362 TASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 541
TASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAY
Sbjct: 236 TASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAY 295
Query: 542 PGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 721
PGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET
Sbjct: 296 PGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 355
Query: 722 ELXYKGIRPAINVGLSVSR 778
EL YKG+RPAINVGLSVSR
Sbjct: 356 ELFYKGVRPAINVGLSVSR 374
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 476 bits (1174), Expect = e-135
Identities = 229/259 (88%), Positives = 246/259 (94%)
Frame = +2
Query: 2 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 181
IDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTG
Sbjct: 108 IDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTG 167
Query: 182 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSA 361
KTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSA
Sbjct: 168 KTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSA 227
Query: 362 TASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 541
TASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAY
Sbjct: 228 TASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAY 287
Query: 542 PGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 721
PGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET
Sbjct: 288 PGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 347
Query: 722 ELXYKGIRPAINVGLSVSR 778
EL YKG+RPAINVGLSVSR
Sbjct: 348 ELFYKGVRPAINVGLSVSR 366
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 476 bits (1174), Expect = e-135
Identities = 229/259 (88%), Positives = 246/259 (94%)
Frame = +2
Query: 2 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 181
IDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTG
Sbjct: 143 IDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTG 202
Query: 182 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSA 361
KTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSA
Sbjct: 203 KTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSA 262
Query: 362 TASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 541
TASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAY
Sbjct: 263 TASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAY 322
Query: 542 PGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 721
PGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET
Sbjct: 323 PGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 382
Query: 722 ELXYKGIRPAINVGLSVSR 778
EL YKG+RPAINVGLSVSR
Sbjct: 383 ELFYKGVRPAINVGLSVSR 401
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 93.9 bits (223), Expect = 1e-19
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Frame = +2
Query: 74 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ---RFNKGEDE 244
R+ E +QTGI A+D + I RGQ+ I +A I+ Q + +E
Sbjct: 157 RIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQ-IVRQGGLVQLPGRNNE 215
Query: 245 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGE 424
++ A+G T + + G+++ + A+D + + P E
Sbjct: 216 TVNFAIVFAAMGVNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAE 275
Query: 425 FFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSD 601
FF + GKH L++ D+S A A R++S PGR +PG ++ + + ERA ++
Sbjct: 276 FFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKG 335
Query: 602 KMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELXYKGIRPAINVGLSVSR 778
+ GS+T +P++ D++ IP IT+GQI+++ +L + I P I+V S+SR
Sbjct: 336 R--EGSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSR 392
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/50 (80%), Positives = 48/50 (96%)
Frame = +2
Query: 335 INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 484
++YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 89.8 bits (213), Expect = 2e-18
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Frame = +2
Query: 74 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED---E 244
R+ E +QTGI A+D + I RGQ+ I +A I+ Q + D E
Sbjct: 145 RIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQ-IVRQGGLVQLPDRPHE 203
Query: 245 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGE 424
+ ++ A+G T + + G++ + A+D + + P E
Sbjct: 204 QTNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTSAE 263
Query: 425 FFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSD 601
F KH L++ D+S A A R++S PGR +PG ++ + + ERA ++
Sbjct: 264 FLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEG 323
Query: 602 KMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELXYKGIRPAINVGLSVSR 778
+ GS+T +P++ D++ IP IT+GQI+++ +L + I P INV S+SR
Sbjct: 324 R--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSR 380
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 72.5 bits (170), Expect = 3e-13
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 7/266 (2%)
Frame = +2
Query: 2 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 181
ID +GPI +K+ + +AP + +E + TGIK VD L P +G + + G G
Sbjct: 161 IDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVG 220
Query: 182 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY------ 343
KT L ++ I N + + G Y ++ +G++ + + + G I+
Sbjct: 221 KTVLIMELINNVAKAHGG-------YSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSK 273
Query: 344 TIIVSATASDAAPLQYLAPYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRR 520
+V ++ + +G + E+FRD G+ L+ D++ + A ++S LL R
Sbjct: 274 VSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 333
Query: 521 PPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITD 700
P Y + + ER GS+T++ I A D++ P + D
Sbjct: 334 IPSAVGYQPTLATDMGSMQERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLD 389
Query: 701 GQIFLETELXYKGIRPAINVGLSVSR 778
L + I PA++ S SR
Sbjct: 390 ATTVLSRGIAELAIYPAVDPLDSTSR 415
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 56.0 bits (129), Expect = 3e-08
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Frame = +2
Query: 65 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 244
+ +++ P+ G + +D+L P +G I G GKT ++ Q +K +
Sbjct: 206 VTEKLAANNPLLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVIS-------QSLSKYSNS 258
Query: 245 KKKLYCIYVAIGQKRSTVAQIVKRLTD---------AGAINYTIIVSATASDAAPLQYLA 397
IYV G++ + ++++++ + + T +V+ T++ + +
Sbjct: 259 DA---IIYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREAS 315
Query: 398 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 577
Y+G + E+FRD G + ++ D S+ A A R++S L P YP + +
Sbjct: 316 IYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFY 375
Query: 578 ERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELXYKGIRP 748
ERA + + GS+T + + GD + + + + I L+ +L + P
Sbjct: 376 ERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFP 435
Query: 749 AINVGLSVS 775
+IN +S S
Sbjct: 436 SINWLISYS 444
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 55 GARYHSPGVCA*AYADWYQGC*LSGTNWPWS 147
G R H VCA W QG S NW W+
Sbjct: 115 GPRNHPTFVCARTNGYWSQGRRFSCANWTWT 145
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 383 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQM 502
+ Y Y C M + F+ NG+ L IYDD++K + Y+Q+
Sbjct: 526 MYYKIDYPTCEMSDNFQ-NGR--LRIYDDINKNSKKYQQI 562
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 283 EEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 420
E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 706 EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 283 EEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 420
E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 706 EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,980,784
Number of Sequences: 27780
Number of extensions: 385023
Number of successful extensions: 1031
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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