Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30953
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118688-1|AAM50548.1|  709|Drosophila melanogaster AT15442p pro...    27   4.5  
AE014298-3210|AAF50936.1|  709|Drosophila melanogaster CG12446-P...    27   4.5  
AY058585-1|AAL13814.1|  763|Drosophila melanogaster LD28027p pro...    26   7.9  
AE014297-270|AAF52011.1|  763|Drosophila melanogaster CG10018-PA...    26   7.9  

>AY118688-1|AAM50548.1|  709|Drosophila melanogaster AT15442p
           protein.
          Length = 709

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 138 LCYSVTILNKVGRELVRLKVCISVLLGLSICS 43
           +C +V ++  V  E   LK+C   L+G S CS
Sbjct: 1   MCAAVCVMVTVPTEAEELKLCPKPLVGASYCS 32


>AE014298-3210|AAF50936.1|  709|Drosophila melanogaster CG12446-PA
           protein.
          Length = 709

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 138 LCYSVTILNKVGRELVRLKVCISVLLGLSICS 43
           +C +V ++  V  E   LK+C   L+G S CS
Sbjct: 1   MCAAVCVMVTVPTEAEELKLCPKPLVGASYCS 32


>AY058585-1|AAL13814.1|  763|Drosophila melanogaster LD28027p
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 120 WLRNNIDFVKIKTTFLQKNLKF 185
           W  +NID + + TT++ KN  F
Sbjct: 392 WNHSNIDLLYLDTTYMNKNYDF 413


>AE014297-270|AAF52011.1|  763|Drosophila melanogaster CG10018-PA
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 120 WLRNNIDFVKIKTTFLQKNLKF 185
           W  +NID + + TT++ KN  F
Sbjct: 392 WNHSNIDLLYLDTTYMNKNYDF 413


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,594,798
Number of Sequences: 53049
Number of extensions: 195074
Number of successful extensions: 262
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)