Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30949
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...    31   1.8  
AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl oxidas...    29   7.3  
AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA...    29   7.3  

>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 189 IQQLNKNKRKLALRENSLDELRIVTGLPLITSRSGNGLHQAIRSSDVIGC 338
           IQ++ K++R  A R    D  RI    PL+      GL +A R+  + GC
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPITGC 232


>AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl
           oxidase-like 2 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 441 LWLVCLSLRIMSDARGVKLHDKPEYVSYDLERIKHNYTNIL 563
           L LVCL+L  +  A  V  H   E    + +R+ H YT +L
Sbjct: 14  LTLVCLTLLAIHMADAVVQHRSLEDARQERQRLVHRYTKVL 54


>AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA
           protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 441 LWLVCLSLRIMSDARGVKLHDKPEYVSYDLERIKHNYTNIL 563
           L LVCL+L  +  A  V  H   E    + +R+ H YT +L
Sbjct: 14  LTLVCLTLLAIHMADAVVQHRSLEDARQERQRLVHRYTKVL 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,391,043
Number of Sequences: 53049
Number of extensions: 538733
Number of successful extensions: 1139
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)