Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30942
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0034 - 9124414-9124599,9124677-9124769,9125022-9125098,912...    32   0.57 
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162...    29   5.3  
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    28   9.3  

>11_03_0034 -
           9124414-9124599,9124677-9124769,9125022-9125098,
           9125725-9126401,9126423-9126653,9127760-9127826,
           9127843-9127993
          Length = 493

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 18/69 (26%), Positives = 29/69 (42%)
 Frame = +3

Query: 6   LEVEDFDVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDDINSKFGIETSTVGVLE 185
           + V D  +E    E+P      ++P +    E   + V + G DI    G+E     +  
Sbjct: 216 ISVPDVPMESAAPEVPMEISVPDVPMETTVAEQDVQIVASVGTDIEDVAGLEWDGTEIEV 275

Query: 186 IKNPVVAKD 212
            +NP  AKD
Sbjct: 276 FENPSPAKD 284


>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
            1625603-1625887,1626016-1626030,1626339-1626419,
            1626909-1627322,1627423-1627719,1627801-1629864
          Length = 3057

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +3

Query: 24   DVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDDINSKFGIETS-TVGVLEIKNPV 200
            +++ E  EI ++P  +      E +ED+  NV    +  + +  +ET  TV     + P 
Sbjct: 1372 EIDTEAIEIESVPHESTTTSVKELNEDVKSNVALAEEAASEEHILETEVTVDKSSAQEPE 1431

Query: 201  VAKDQNKDVAPKEASYNL 254
            +  ++ K+  P E  +N+
Sbjct: 1432 L--EEIKNTEPAEQEHNI 1447


>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
            693391-693518,693951-694010,694113-694163,694704-694821,
            694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 20/74 (27%), Positives = 35/74 (47%)
 Frame = +3

Query: 24   DVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDDINSKFGIETSTVGVLEIKNPVV 203
            D+EPE    P IPE+ EL Q+ +   + S +  +   + +S   I  S    L+ K    
Sbjct: 1263 DIEPECPSPPQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPE 1322

Query: 204  AKDQNKDVAPKEAS 245
            +   N+D+  ++ S
Sbjct: 1323 SSSDNQDIKCEDPS 1336


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,029,261
Number of Sequences: 37544
Number of extensions: 273771
Number of successful extensions: 626
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)