Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30942
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical pr...    36   0.041
Z27078-3|CAA81585.1|  251|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U58752-7|AAB00669.1|  343|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF003151-7|AAK18910.1|  264|Caenorhabditis elegans Hypothetical ...    28   6.3  
U40029-10|AAN65326.1|  644|Caenorhabditis elegans Hypothetical p...    28   8.3  
U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical
           protein T25E12.13 protein.
          Length = 325

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +2

Query: 482 MFYKHHVIFV*T--ALFKHLVLKFFFNTNNIYSNYFFVVLSLAIYFKSSCPL 631
           MF  +++ F  +   LFK ++L + F+T N YS +F +++ +AI    + PL
Sbjct: 224 MFLHNYIFFQSSLVVLFKLIILPYCFDTGNFYSKFFLMMMKIAIGDVLTAPL 275


>Z27078-3|CAA81585.1|  251|Caenorhabditis elegans Hypothetical
           protein K04H4.5 protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +3

Query: 12  VEDFDVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDDINSKF-GIETSTVGVLEI 188
           VE F +EPE  ++  + E+ +LP      E  S   +N  + + S + G+E+  +  +  
Sbjct: 4   VESFYLEPEATQMFGMTESNDLPPLENLQELASVIDVNIKEPLVSDYCGLESDDIPPI-Y 62

Query: 189 KNPVVAKDQNKDVAPKEASYNLY 257
           +  + A  + K +A ++A  + Y
Sbjct: 63  RAQLRAAQKEKIIAAEQADKSFY 85


>U58752-7|AAB00669.1|  343|Caenorhabditis elegans Hypothetical
           protein B0218.7 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 99  EDLSENVINTGDDINSKFGIETSTVGVLEIKNPVVAKDQNKDVAPKEASYNLY 257
           E+L   ++ + +++ S F ++ S    L+IKN ++ ++QN+       +YN Y
Sbjct: 20  ENLLSIIVKSFENVTSDFSLKNSRQ--LQIKNQLILENQNRFFVMIHDTYNPY 70


>AF003151-7|AAK18910.1|  264|Caenorhabditis elegans Hypothetical
           protein D1007.3 protein.
          Length = 264

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 45  EIPTIPETTELPQKVETHEDLSENVINTGDDINSK 149
           ++PTIPE  E+P+    H    + V N   DI ++
Sbjct: 146 QMPTIPEIPEIPEIRRKHSKPRKAVFNEDGDITTR 180


>U40029-10|AAN65326.1|  644|Caenorhabditis elegans Hypothetical
           protein F10G7.9b protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 12  VEDFDVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDD 137
           VE  ++E EVNE   + E  E    VE   D  +N    G+D
Sbjct: 423 VEPINIEKEVNESEVVVEKKETDVVVENKNDEIQNESVEGED 464


>U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical
           protein F10G7.9a protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 12  VEDFDVEPEVNEIPTIPETTELPQKVETHEDLSENVINTGDD 137
           VE  ++E EVNE   + E  E    VE   D  +N    G+D
Sbjct: 506 VEPINIEKEVNESEVVVEKKETDVVVENKNDEIQNESVEGED 547


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,678,008
Number of Sequences: 27780
Number of extensions: 273811
Number of successful extensions: 975
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)