BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30939
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001573-1|AAN71328.1| 919|Drosophila melanogaster RE22749p pro... 129 4e-30
AE014297-4715|AAF57126.2| 919|Drosophila melanogaster CG1544-PA... 129 4e-30
AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p pro... 64 1e-10
AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC... 64 1e-10
AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA... 64 1e-10
AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD... 64 1e-10
AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB... 64 1e-10
BT012466-1|AAS93737.1| 1017|Drosophila melanogaster RE42354p pro... 32 0.89
BT003743-1|AAO41404.1| 1008|Drosophila melanogaster SD10782p pro... 32 0.89
AE014296-2847|AAO41241.1| 1008|Drosophila melanogaster CG11661-P... 32 0.89
AE014296-2846|AAO41240.1| 1008|Drosophila melanogaster CG11661-P... 32 0.89
AE014296-2845|AAF49389.2| 1008|Drosophila melanogaster CG11661-P... 32 0.89
AE014296-2844|AAN11722.1| 1008|Drosophila melanogaster CG11661-P... 32 0.89
AE014296-2843|AAF49388.2| 1008|Drosophila melanogaster CG11661-P... 32 0.89
AE014296-2842|AAN11721.1| 1017|Drosophila melanogaster CG11661-P... 32 0.89
AY119278-1|AAM51138.1| 604|Drosophila melanogaster SD26982p pro... 29 4.7
AE014134-3157|AAF53841.1| 604|Drosophila melanogaster CG10463-P... 29 4.7
AE014297-4716|AAN14266.1| 738|Drosophila melanogaster CG1544-PB... 29 6.3
AY069773-1|AAL39918.1| 540|Drosophila melanogaster SD01519p pro... 29 8.3
AY069255-1|AAL39400.1| 966|Drosophila melanogaster GM03058p pro... 29 8.3
AF188718-1|AAF05593.1| 966|Drosophila melanogaster alanyl-tRNA ... 29 8.3
AE014134-1481|AAS64737.1| 966|Drosophila melanogaster CG13391-P... 29 8.3
AE014134-1480|AAF52657.1| 966|Drosophila melanogaster CG13391-P... 29 8.3
>BT001573-1|AAN71328.1| 919|Drosophila melanogaster RE22749p
protein.
Length = 919
Score = 129 bits (311), Expect = 4e-30
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 60 YHSGAGVFGHRPTIADEYEIPEDIISKRYKNCRAQQLVDAYRTYGHLKATIDNVDYRNES 239
YHS GV+G++P E+++ ED+ + R + V+A+R +GH A ++ + R
Sbjct: 23 YHSEKGVWGYKPIAQREFQVAEDVRASRNSQANVYRFVEAFRQHGHKLAAVNPISIRTSQ 82
Query: 240 RNIKELHYSRYGLDPEETVDT-GLLYGYSGNNSIKSLVDELVKIYCGH-ISYEFTHLESE 413
+ ++EL + YGL +E V T GLL G +++ L L IYCG S EF+++E
Sbjct: 83 QELQELSPAFYGLQTQEPVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDI 142
Query: 414 AEREWFAQRIES-GVDPVENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEG 572
EREW A+ E+ + R EI + L+ SQAWD F+++K+PTVKRY GEG
Sbjct: 143 EEREWLARNFETLDQQQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEG 196
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCPPVKI 712
IE V+L M HRG+ + + LL P K+
Sbjct: 216 IEHVVLAMPHRGRTPLQAALLNMRPAKV 243
>AE014297-4715|AAF57126.2| 919|Drosophila melanogaster CG1544-PA,
isoform A protein.
Length = 919
Score = 129 bits (311), Expect = 4e-30
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 60 YHSGAGVFGHRPTIADEYEIPEDIISKRYKNCRAQQLVDAYRTYGHLKATIDNVDYRNES 239
YHS GV+G++P E+++ ED+ + R + V+A+R +GH A ++ + R
Sbjct: 23 YHSEKGVWGYKPIAQREFQVAEDVRASRNSQANVYRFVEAFRQHGHKLAAVNPISIRTSQ 82
Query: 240 RNIKELHYSRYGLDPEETVDT-GLLYGYSGNNSIKSLVDELVKIYCGH-ISYEFTHLESE 413
+ ++EL + YGL +E V T GLL G +++ L L IYCG S EF+++E
Sbjct: 83 QELQELSPAFYGLQTQEPVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDI 142
Query: 414 AEREWFAQRIES-GVDPVENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEG 572
EREW A+ E+ + R EI + L+ SQAWD F+++K+PTVKRY GEG
Sbjct: 143 EEREWLARNFETLDQQQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEG 196
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCPPVKI 712
IE V+L M HRG+ + + LL P K+
Sbjct: 216 IEHVVLAMPHRGRTPLQAALLNMRPAKV 243
>AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p
protein.
Length = 1282
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Frame = +3
Query: 162 QQLVDAYRTYGHLKATID-----------NVD--YRNESRNIKELHYSRYGLDPEETV-- 296
Q ++ AY++ GHL A +D +VD R+ +R + H+S Y + TV
Sbjct: 147 QAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFS-YIFNDLNTVFK 205
Query: 297 --DTGLLYGYSGNNSIKSLVDELVKIYCGHISYEFTHLESEAEREWFAQRIE--SGVDPV 464
+ ++ G S+K ++D L +IYCGHI E+ + S + W R E G+D
Sbjct: 206 LPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTNWLRDRFEKPGGLDLT 265
Query: 465 ENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY*PSFRLYFD 611
+ ++++ IL+ L S ++ FL+ K+ + KR+ EG + P+ + D
Sbjct: 266 KEEKKL-ILERLTRSTGFENFLAKKFSSEKRFGLEGCDIMIPAIKEVVD 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E +++GMAHRG+LNVL+ + + P
Sbjct: 320 VESILIGMAHRGRLNVLANICRKP 343
>AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC,
isoform C protein.
Length = 1238
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Frame = +3
Query: 162 QQLVDAYRTYGHLKATID-----------NVD--YRNESRNIKELHYSRYGLDPEETV-- 296
Q ++ AY++ GHL A +D +VD R+ +R + H+S Y + TV
Sbjct: 147 QAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFS-YIFNDLNTVFK 205
Query: 297 --DTGLLYGYSGNNSIKSLVDELVKIYCGHISYEFTHLESEAEREWFAQRIE--SGVDPV 464
+ ++ G S+K ++D L +IYCGHI E+ + S + W R E G+D
Sbjct: 206 LPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTNWLRDRFEKPGGLDLT 265
Query: 465 ENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY*PSFRLYFD 611
+ ++++ IL+ L S ++ FL+ K+ + KR+ EG + P+ + D
Sbjct: 266 KEEKKL-ILERLTRSTGFENFLAKKFSSEKRFGLEGCDIMIPAIKEVVD 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E +++GMAHRG+LNVL+ + + P
Sbjct: 320 VESILIGMAHRGRLNVLANICRKP 343
>AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA,
isoform A protein.
Length = 1238
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Frame = +3
Query: 162 QQLVDAYRTYGHLKATID-----------NVD--YRNESRNIKELHYSRYGLDPEETV-- 296
Q ++ AY++ GHL A +D +VD R+ +R + H+S Y + TV
Sbjct: 147 QAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFS-YIFNDLNTVFK 205
Query: 297 --DTGLLYGYSGNNSIKSLVDELVKIYCGHISYEFTHLESEAEREWFAQRIE--SGVDPV 464
+ ++ G S+K ++D L +IYCGHI E+ + S + W R E G+D
Sbjct: 206 LPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTNWLRDRFEKPGGLDLT 265
Query: 465 ENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY*PSFRLYFD 611
+ ++++ IL+ L S ++ FL+ K+ + KR+ EG + P+ + D
Sbjct: 266 KEEKKL-ILERLTRSTGFENFLAKKFSSEKRFGLEGCDIMIPAIKEVVD 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E +++GMAHRG+LNVL+ + + P
Sbjct: 320 VESILIGMAHRGRLNVLANICRKP 343
>AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD,
isoform D protein.
Length = 1282
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Frame = +3
Query: 162 QQLVDAYRTYGHLKATID-----------NVD--YRNESRNIKELHYSRYGLDPEETV-- 296
Q ++ AY++ GHL A +D +VD R+ +R + H+S Y + TV
Sbjct: 147 QAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFS-YIFNDLNTVFK 205
Query: 297 --DTGLLYGYSGNNSIKSLVDELVKIYCGHISYEFTHLESEAEREWFAQRIE--SGVDPV 464
+ ++ G S+K ++D L +IYCGHI E+ + S + W R E G+D
Sbjct: 206 LPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTNWLRDRFEKPGGLDLT 265
Query: 465 ENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY*PSFRLYFD 611
+ ++++ IL+ L S ++ FL+ K+ + KR+ EG + P+ + D
Sbjct: 266 KEEKKL-ILERLTRSTGFENFLAKKFSSEKRFGLEGCDIMIPAIKEVVD 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E +++GMAHRG+LNVL+ + + P
Sbjct: 320 VESILIGMAHRGRLNVLANICRKP 343
>AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB,
isoform B protein.
Length = 1282
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Frame = +3
Query: 162 QQLVDAYRTYGHLKATID-----------NVD--YRNESRNIKELHYSRYGLDPEETV-- 296
Q ++ AY++ GHL A +D +VD R+ +R + H+S Y + TV
Sbjct: 147 QAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFS-YIFNDLNTVFK 205
Query: 297 --DTGLLYGYSGNNSIKSLVDELVKIYCGHISYEFTHLESEAEREWFAQRIE--SGVDPV 464
+ ++ G S+K ++D L +IYCGHI E+ + S + W R E G+D
Sbjct: 206 LPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTNWLRDRFEKPGGLDLT 265
Query: 465 ENDRRIEILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY*PSFRLYFD 611
+ ++++ IL+ L S ++ FL+ K+ + KR+ EG + P+ + D
Sbjct: 266 KEEKKL-ILERLTRSTGFENFLAKKFSSEKRFGLEGCDIMIPAIKEVVD 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E +++GMAHRG+LNVL+ + + P
Sbjct: 320 VESILIGMAHRGRLNVLANICRKP 343
>BT012466-1|AAS93737.1| 1017|Drosophila melanogaster RE42354p
protein.
Length = 1017
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 306 VESVIMGMPHRGRLNTLANVCRKP 329
>BT003743-1|AAO41404.1| 1008|Drosophila melanogaster SD10782p
protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2847|AAO41241.1| 1008|Drosophila melanogaster CG11661-PH,
isoform H protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2846|AAO41240.1| 1008|Drosophila melanogaster CG11661-PG,
isoform G protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2845|AAF49389.2| 1008|Drosophila melanogaster CG11661-PC,
isoform C protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2844|AAN11722.1| 1008|Drosophila melanogaster CG11661-PB,
isoform B protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2843|AAF49388.2| 1008|Drosophila melanogaster CG11661-PA,
isoform A protein.
Length = 1008
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 297 VESVIMGMPHRGRLNTLANVCRKP 320
>AE014296-2842|AAN11721.1| 1017|Drosophila melanogaster CG11661-PF,
isoform F protein.
Length = 1017
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCP 700
+E VI+GM HRG+LN L+ + + P
Sbjct: 306 VESVIMGMPHRGRLNTLANVCRKP 329
>AY119278-1|AAM51138.1| 604|Drosophila melanogaster SD26982p
protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 486 ILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY 584
I +E+ QAW +Y ++++C GL H+
Sbjct: 484 IFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHW 516
>AE014134-3157|AAF53841.1| 604|Drosophila melanogaster CG10463-PA
protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 486 ILKELLHSQAWDKFLSIKYPTVKRYCGEGLNHY 584
I +E+ QAW +Y ++++C GL H+
Sbjct: 484 IFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHW 516
>AE014297-4716|AAN14266.1| 738|Drosophila melanogaster CG1544-PB,
isoform B protein.
Length = 738
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 629 IEQVILGMAHRGKLNVLSGLLQCPPVKI 712
IE V+L M HRG+ + + LL P K+
Sbjct: 35 IEHVVLAMPHRGRTPLQAALLNMRPAKV 62
>AY069773-1|AAL39918.1| 540|Drosophila melanogaster SD01519p
protein.
Length = 540
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 80 LRASTDDCR*IRDSRGHNIKEI*ELPSATAGRRLPYVRTSKSYYR*RRLQK*KQEYQRA 256
L+A+ D+ + +DS+ H +KEI EL + +PYV+ + + L+K + +RA
Sbjct: 351 LKATIDNDKSGKDSKSH-VKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERA 408
>AY069255-1|AAL39400.1| 966|Drosophila melanogaster GM03058p
protein.
Length = 966
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 80 LRASTDDCR*IRDSRGHNIKEI*ELPSATAGRRLPYVRTSKSYYR*RRLQK*KQEYQRA 256
L+A+ D+ + +DS+ H +KEI EL + +PYV+ + + L+K + +RA
Sbjct: 777 LKATIDNDKSGKDSKSH-VKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERA 834
>AF188718-1|AAF05593.1| 966|Drosophila melanogaster alanyl-tRNA
synthetase protein.
Length = 966
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 80 LRASTDDCR*IRDSRGHNIKEI*ELPSATAGRRLPYVRTSKSYYR*RRLQK*KQEYQRA 256
L+A+ D+ + +DS+ H +KEI EL + +PYV+ + + L+K + +RA
Sbjct: 777 LKATIDNDKSGKDSKSH-VKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERA 834
>AE014134-1481|AAS64737.1| 966|Drosophila melanogaster CG13391-PB,
isoform B protein.
Length = 966
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 80 LRASTDDCR*IRDSRGHNIKEI*ELPSATAGRRLPYVRTSKSYYR*RRLQK*KQEYQRA 256
L+A+ D+ + +DS+ H +KEI EL + +PYV+ + + L+K + +RA
Sbjct: 777 LKATIDNDKSGKDSKSH-VKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERA 834
>AE014134-1480|AAF52657.1| 966|Drosophila melanogaster CG13391-PA,
isoform A protein.
Length = 966
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 80 LRASTDDCR*IRDSRGHNIKEI*ELPSATAGRRLPYVRTSKSYYR*RRLQK*KQEYQRA 256
L+A+ D+ + +DS+ H +KEI EL + +PYV+ + + L+K + +RA
Sbjct: 777 LKATIDNDKSGKDSKSH-VKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERA 834
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,277,775
Number of Sequences: 53049
Number of extensions: 631332
Number of successful extensions: 1911
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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