Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30938
(455 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.084
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.15
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.19
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 1.0
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 27 1.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 1.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 1.8
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 2.4
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 2.4
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 26 3.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 22 3.9
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 25 4.2
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 4.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 4.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 5.5
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 5.5
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 5.5
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 25 5.5
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 7.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 7.3
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 7.3
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 25 7.3
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 25 7.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.009
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 324 PGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPK 425
P +++P L P P PPPS SP P PP+
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPR 273
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 378 AEGSFPAPARPNRASGPPEPVLSPAARR 295
A GS P P + A PP P +P+ R
Sbjct: 347 AAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.084
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 PAPGDQMPDL--DVPVPE------KTPPPSEAPRDSPSPTEPP 422
PAP Q+P +VPVP + PP S AP +PS T PP
Sbjct: 1479 PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPP 1521
Score = 28.3 bits (60), Expect = 0.59
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 321 APGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 419
AP P + VP P PP P +P P P
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.4 bits (53), Expect = 4.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 321 APGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPP 422
AP P P PPP AP P P PP
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAP---PMPAGPP 1728
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 30.3 bits (65), Expect = 0.15
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKLN 431
P P + +P+ P+P + P P E + P P EPP N
Sbjct: 108 PLPNEPVPE--EPLPGEPPLPDEPVPEEPLPGEPPLPN 143
Score = 28.7 bits (61), Expect = 0.45
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP-PKLN 431
P P + +P + P+P++ P P + P P EP P+ N
Sbjct: 113 PVPEEPLPG-EPPLPDEPVPEEPLPGEPPLPNEPVPETN 150
Score = 27.5 bits (58), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 354 PVPEKTPPPSEAPRDSPSPTEPP 422
P+P + P P+E + P P EPP
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPP 124
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.19
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 315 APAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKL 428
+PA +P P+P PPP++ SP P L
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Score = 26.2 bits (55), Expect = 2.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +3
Query: 309 VIAPAPGDQMPDLDVPVPEKTPPP--SEAP----RDSPSPTEPP 422
V +P +P P+P K PPP S+AP PS PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 25.8 bits (54), Expect = 3.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPP-PSEAPRDSPSPTEPP 422
P P + P P PP PS+AP PS PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAP-PIPSSLPPP 174
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 27.5 bits (58), Expect = 1.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 138 GKPGQYIGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKQVVARIKERPDD 296
G G Y+G + GSPA L+ I+ V+GH I T + E+P D
Sbjct: 895 GPEGVYVGSILYGSPALNM-LRAAHWIVAVDGHDI--NTFDDFYHMLLEKPTD 944
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 26.6 bits (56), Expect = 1.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 315 APAPGDQMPDL--DVPVPEKTPPPSEAPRDSPSPTEPPKLNLQMTAAE 452
AP P P+ + + PP S+A R P PTEPP + T++E
Sbjct: 78 APPPYTAEPEARYNSTIHNPMPPMSQAYR--PPPTEPPTVPAYETSSE 123
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 288 PDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSP 410
P L I APG MP+L++ P PP P P+P
Sbjct: 500 PPGVPLPPIPGAPG--MPNLNMSQPPMVPPGMALPPGMPAP 538
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 DDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAP-RDSPSPTEPP 422
+ +LL+ +P P + P P P P AP P P PP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.0 bits (52), Expect = 5.5
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Frame = +3
Query: 288 PDDAELLVIAPAPGDQMPDLDVPV----PEKTPPPSEAPRDSPSPTEPP 422
P ++V PAP P+ P PPP A P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 1.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 285 RPDDAELLVIAPAPGDQMPDLDV-----PVPEKTPPPSEAPRD-SPSPTEP 419
RPD +L +PG + LD+ P PE PP++ P D SP EP
Sbjct: 146 RPDSQKL-----SPGKEKNTLDLKHCLLPSPEYKAPPAKKPEDYEASPGEP 191
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 26.2 bits (55), Expect = 2.4
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 RAIVNLTDVLTGFSFL--CVQVKPVAVEVWRLPHVAESWLDGRRPVR 45
RA+ TD S L V++K V+ + P AE W+ GR+ R
Sbjct: 646 RALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTR 692
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 26.2 bits (55), Expect = 2.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 237 SIAGETHKQVVARIKERPDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTE 416
S++ ET ++ +++KE + L + Q P +P + + AP+ SP +
Sbjct: 574 SLSEETKQEKPSKLKETVESKRL---STGVQKQSPAASKEIPVTSGSQTTAPKPSPWKSL 630
Query: 417 PPK 425
PPK
Sbjct: 631 PPK 633
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 3.1
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 21 VLRPPYMSANGSAAIEPRLCHVRK-TPDFDG 110
++RP N + P LCHV K DFDG
Sbjct: 503 LIRPIIAYINSTRTFIPILCHVSKPLSDFDG 533
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.2 bits (45), Expect(2) = 3.9
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +3
Query: 357 VPEKTPPPSEAPRDSPSPTEPPKLNLQMT 443
+P P P +P P PP L Q T
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPPQST 251
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 315 APAPGDQMPDLDVPVPEKTPPPS 383
A AP +P P P PPP+
Sbjct: 176 AAAPATSLPSDYNPPPPPPPPPA 198
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 4.2
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 231 GHSIAGETHKQVVARIKERPDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSP 410
GHS A E + +I+E P+ + D + ++ V E +PP + A +P
Sbjct: 542 GHSEAIERLALLENQIQE-PEPENITSSQYPNQDVIKEIPVTASETSPPHAPAVSSTPVT 600
Query: 411 TEPPKLNLQMT 443
+ PP ++T
Sbjct: 601 SAPPVSQTKVT 611
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 4.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 354 ARPNRASGPPEPVLSP 307
+RP+ S PPEP+LSP
Sbjct: 574 SRPSPLSLPPEPLLSP 589
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 4.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 315 APAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPP 422
A AP +P PVP T P S +P+ PP
Sbjct: 1029 ADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 419
P P P VP+P TPP ++ +PS P
Sbjct: 1035 PVPSTAPP---VPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPP 422
P+ +P V VP PP + P +PS PP
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 25.0 bits (52), Expect = 5.5
Identities = 11/53 (20%), Positives = 24/53 (45%)
Frame = +3
Query: 273 RIKERPDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKLN 431
++ E +DA+ ++A P ++ +PE + +PSP + L+
Sbjct: 545 KVTEPSNDADKAIVAEGPNNEEETKGPVIPETQETSEQQVHKTPSPEKQKVLS 597
Score = 25.0 bits (52), Expect = 5.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 312 IAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 419
I P P + VP P PP AP +P +P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 25.0 bits (52), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAP-RDSPSPTEP 419
P P +P VPVP PP AP ++PS + P
Sbjct: 1220 PTPSAGLPP--VPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 24.2 bits (50), Expect = 9.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 318 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 419
PAP +P VP P PP P ++P +P
Sbjct: 1172 PAPSSGIPP--VPKPAAGVPPVPPPSEAPPVPKP 1203
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.0 bits (52), Expect = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 372 GSFPAPA-RPNRASGPPEPVLSPAARRHQVAP 280
G+ +PA +P PP P +PA + H P
Sbjct: 716 GAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPP 747
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.0 bits (52), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = +3
Query: 321 APGDQMPDLDVPV-PEKTPPP------SEAPRDSPSPTEPPK 425
AP +P P P ++PPP S PR P+ PP+
Sbjct: 401 APTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLPPR 442
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 5.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 46 RTGRRPSSHDSATCGRRQTSTATGLTCTHKKENPVSTS 159
R G +PS S +R S +T T + NPVS +
Sbjct: 93 RDGAKPSGTASGADVKRSDSESTEATSNERPFNPVSAA 130
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 5.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 DQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPK 425
+ P P P+ P +P+ P+ +EP K
Sbjct: 170 ESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVK 201
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 7.3
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 4 RGTVSAYSDHRTCPRTGRRPSSHDSATCGRRQTSTATGLTCTHKKENPVSTS 159
RGT+S D+R C R SS S+ +AT T T K+N S +
Sbjct: 883 RGTISVNCDYRPCLRLNTDNSSKQSS----ENVQSATDPT-TPAKDNSTSNA 929
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 360 PEKTPPPSEAPRDSPSPTEPP 422
P PPP P P P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 357 VPEKTPPPSEAPRDSPSPTEP 419
+ + P PSE+PR S S T P
Sbjct: 251 IDNEIPKPSESPRRSVSSTPP 271
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 109 PSKSGVFRTWQSRGSMAA 56
PS+ +FR+W SR S +A
Sbjct: 772 PSREWIFRSWVSRDSRSA 789
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 210 DRILEVNGHSIAGETHKQVVARIKERPDDAELLVIAPA 323
DR++E+NG ++ G + V + + P ++ L + A
Sbjct: 261 DRLIEMNGQTVRGRAYPWGVVEV-DNPRHSDFLALRSA 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,910,182
Number of Sequences: 5004
Number of extensions: 40409
Number of successful extensions: 196
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -