Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30938
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   0.68 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   2.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   2.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 321 APGDQ-MPDLDVPVPEK-TPP-PSEAPRDSPSPTEPPKLN 431
           APG Q  P      P++ +PP PS+ P     P  PP  N
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQN 59


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 231 RSLRGCGRRVLNQRSLPESHRQPYRCTDRVF 139
           R LR  GR+ +     PE+    Y  +DR++
Sbjct: 405 RELRNLGRKTIMVNYNPETVSTDYDMSDRLY 435


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 324 PGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 419
           PG+  P   + +P+  PP     R++ S  EP
Sbjct: 70  PGNNRP---IYIPQPRPPHPRLRREAESEAEP 98


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/58 (20%), Positives = 24/58 (41%)
 Frame = -1

Query: 245 GDTMTVHFEDAVAAF*TSGLCRRAIVNLTDVLTGFSFLCVQVKPVAVEVWRLPHVAES 72
           G+ +TV F   +A+   + +   A++ +  VLT        +  +    W L  +  S
Sbjct: 422 GEVITVSFTATLASIGAASIPSAALITMLIVLTALGLPTNDISLLFAVDWMLDRIRTS 479


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 198 NQRSLPESHRQP 163
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 198 NQRSLPESHRQP 163
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 198 NQRSLPESHRQP 163
           N+RS P SH +P
Sbjct: 261 NERSTPRSHAKP 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,179
Number of Sequences: 438
Number of extensions: 3749
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)