Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30927
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    32   0.39 
AL132904-25|CAB81956.2|  434|Caenorhabditis elegans Hypothetical...    31   0.51 
Z81540-10|CAB04398.1|  354|Caenorhabditis elegans Hypothetical p...    30   1.6  
U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine rec...    29   3.6  
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z68336-4|CAA92739.2|  269|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical p...    28   4.8  
U42843-5|AAA83597.2|  375|Caenorhabditis elegans Beclin (human a...    28   6.3  
AC006791-5|AAF60739.1|  330|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical ...    27   8.3  
AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical ...    27   8.3  

>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 411 DVFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSC 539
           D+++  +      IP+     L +DR+GR+  L    F AG+C
Sbjct: 395 DIYVNFIFAAFVEIPALFIVYLLIDRIGRRLILAGGLFIAGAC 437


>AL132904-25|CAB81956.2|  434|Caenorhabditis elegans Hypothetical
           protein Y111B2A.5a protein.
          Length = 434

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 527 RECCKHKEELSPEPVHAEDRED-IGGYGGRDGDERLHEDVGVYVRVALRGGGVRAEPRHV 351
           RE C+ +E+L+   +  +  E+ +         ER+ E+       A  GGG R E  H+
Sbjct: 183 REICQLEEKLTESELKTQRSEEKVKNLEDFIVGERM-EEAEAEAEAAADGGGARNEVSHL 241

Query: 350 RRHLADVR 327
           +R++AD++
Sbjct: 242 KRYIADLQ 249


>Z81540-10|CAB04398.1|  354|Caenorhabditis elegans Hypothetical
           protein F46B3.9 protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -3

Query: 475 RTAKILEGMAAATVMSDSMKTSECMCESHCAAAECVPSRVT 353
           +  K++ G        D     +C   SHC   ECVP  VT
Sbjct: 156 QNCKLVNGSPKCVPELDQCSHIKCSIGSHCENGECVPDAVT 196


>U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical
           protein C03B1.13 protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +3

Query: 456 SNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYNKTNNLIVSAIFSS 605
           +++F +   DR GR+  ++   F  G+C A +  V   TN +IVS  F++
Sbjct: 268 ASLFGIYLADRFGRRKLVLVGLF--GTCVANIGAVVFTTNKVIVSLCFAA 315


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/64 (26%), Positives = 23/64 (35%)
 Frame = -3

Query: 502 NFLPSLSMPRTAKILEGMAAATVMSDSMKTSECMCESHCAAAECVPSRVTYDVTSQMSAS 323
           N  PS   P    +              KT    C+  C   ECV    TY ++  M+ +
Sbjct: 588 NSCPSACQPACEPLCVQQITVQTTVPITKTCVPQCQPACTQ-ECVQQATTYTISIPMTTA 646

Query: 322 ALSC 311
           A SC
Sbjct: 647 APSC 650


>U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine
           receptor, class v protein17 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 601 LNIALTIRLFVLLYTKYMAAEHEPAENVANTRKNF 497
           L+ A  + L + L   Y +AE E ++ +ANTRK F
Sbjct: 221 LSFAAELILLIYLSFSYYSAEIEDSDLIANTRKYF 255


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 458 GGYGGRDGDERLHEDVGVYVRVALRGGGVRAEPR 357
           GGYGG  G    + D G Y     R GG+R  PR
Sbjct: 523 GGYGGGYGGPGAYGDFGAYGGGGFR-GGMRGSPR 555


>Z68336-4|CAA92739.2|  269|Caenorhabditis elegans Hypothetical
           protein F22B3.7 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -3

Query: 514 NTRKNFLPSLSMPRTAKILEGMAAATVMSDSMKTSECMC-ESHCAAAECVPSRVTYDVTS 338
           + R N  P L  P+T   ++GM   T    + KT+ECM  +    A   V +   Y+  +
Sbjct: 154 DVRTNLFPLLKTPQTYARMDGM-RTTACRATPKTAECMSPQGFTFAGPPVTTFENYNWVT 212

Query: 337 QMSASA 320
             SA A
Sbjct: 213 DASAMA 218


>Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 15  SIYLMNTGRSKDEYPVKQILVDDLVHAKPEKQIESKEPKSKLRRMLSDIVEHSKQ 179
           S+Y+ NTG +   +   + L  + V A    +  SK PK  LR   + ++   +Q
Sbjct: 644 SVYMYNTGSANSTFMSAKDLHKERVAASTGPRSASKSPKGTLRVKETKVIREVRQ 698


>Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 15  SIYLMNTGRSKDEYPVKQILVDDLVHAKPEKQIESKEPKSKLRRMLSDIVEHSKQ 179
           S+Y+ NTG +   +   + L  + V A    +  SK PK  LR   + ++   +Q
Sbjct: 644 SVYMYNTGSANSTFMSAKDLHKERVAASTGPRSASKSPKGTLRVKETKVIREVRQ 698


>U42843-5|AAA83597.2|  375|Caenorhabditis elegans Beclin (human
           autophagy) homologprotein 1 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -2

Query: 287 IEHLREPHHQTVIPDMECKV-DCNRDRSELEYRRNKQLLA 171
           I +L+E H  T IPD++ K+ + + +  ELE ++ K+LLA
Sbjct: 94  INYLKENHPTTSIPDLKAKLQNVSDEEKELE-QQLKKLLA 132


>AC006791-5|AAF60739.1|  330|Caenorhabditis elegans Hypothetical
           protein Y4C6A.3 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 585 RSGCSFCCTRSTWRLNTSQPRMLQTQGRTFSRAC 484
           R  C+ C T+ +   +T  PR+L   G T    C
Sbjct: 252 RPTCAICSTKYSKNCSTQTPRILDKCGHTLCEGC 285


>Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 414 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYN 566
           +F+  + +    +P+ I   L +DRLGR+     A F+AG    A +  ++
Sbjct: 377 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHD 427


>Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 414 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYN 566
           +F+  + +    +P+ I   L +DRLGR+     A F+AG    A +  ++
Sbjct: 343 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHD 393


>AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 414 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYN 566
           +F+  + +    +P+ I   L +DRLGR+     A F+AG    A +  ++
Sbjct: 377 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHD 427


>AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 414 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYN 566
           +F+  + +    +P+ I   L +DRLGR+     A F+AG    A +  ++
Sbjct: 343 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHD 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,202,840
Number of Sequences: 27780
Number of extensions: 244500
Number of successful extensions: 998
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)