Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30924
         (301 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015971-1|AAH15971.1|   63|Homo sapiens ubiquinol-cytochrome c ...    72   3e-13
BC005402-1|AAH05402.1|   63|Homo sapiens ubiquinol-cytochrome c ...    72   3e-13
AB028598-1|BAB20672.1|   63|Homo sapiens ubiquinol-cytochrome C ...    72   3e-13
U73960-1|AAB39713.1|  200|Homo sapiens ADP-ribosylation factor-l...    27   8.2  
BC039123-1|AAH39123.1|  200|Homo sapiens ARL4A protein protein.        27   8.2  
BC003027-1|AAH03027.1|  200|Homo sapiens ADP-ribosylation factor...    27   8.2  
BC001111-1|AAH01111.1|  200|Homo sapiens ADP-ribosylation factor...    27   8.2  
AF493890-1|AAM12604.1|  200|Homo sapiens ADP-ribosylation factor...    27   8.2  

>BC015971-1|AAH15971.1|   63|Homo sapiens ubiquinol-cytochrome c
           reductase complex (7.2 kD) protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 44  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 217
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


>BC005402-1|AAH05402.1|   63|Homo sapiens ubiquinol-cytochrome c
           reductase complex (7.2 kD) protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 44  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 217
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


>AB028598-1|BAB20672.1|   63|Homo sapiens ubiquinol-cytochrome C
           reductase complex 7.2 kDa protein homologue protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 44  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 217
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


>U73960-1|AAB39713.1|  200|Homo sapiens ADP-ribosylation factor-like
           protein 4 protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 194 PSIVFLC*GFQISIETLIQMFFQRRKFLRQQPKQ 93
           P+   +  G +  +E L  M  +RRK LRQQ K+
Sbjct: 166 PTCAIIGDGLKEGLEKLHDMIIKRRKMLRQQKKK 199


>BC039123-1|AAH39123.1|  200|Homo sapiens ARL4A protein protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 194 PSIVFLC*GFQISIETLIQMFFQRRKFLRQQPKQ 93
           P+   +  G +  +E L  M  +RRK LRQQ K+
Sbjct: 166 PTCAIIGDGLKEGLEKLHDMIIKRRKMLRQQKKK 199


>BC003027-1|AAH03027.1|  200|Homo sapiens ADP-ribosylation
           factor-like 4A protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 194 PSIVFLC*GFQISIETLIQMFFQRRKFLRQQPKQ 93
           P+   +  G +  +E L  M  +RRK LRQQ K+
Sbjct: 166 PTCAIIGDGLKEGLEKLHDMIIKRRKMLRQQKKK 199


>BC001111-1|AAH01111.1|  200|Homo sapiens ADP-ribosylation
           factor-like 4A protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 194 PSIVFLC*GFQISIETLIQMFFQRRKFLRQQPKQ 93
           P+   +  G +  +E L  M  +RRK LRQQ K+
Sbjct: 166 PTCAIIGDGLKEGLEKLHDMIIKRRKMLRQQKKK 199


>AF493890-1|AAM12604.1|  200|Homo sapiens ADP-ribosylation
           factor-like protein 4 protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 194 PSIVFLC*GFQISIETLIQMFFQRRKFLRQQPKQ 93
           P+   +  G +  +E L  M  +RRK LRQQ K+
Sbjct: 166 PTCAIIGDGLKEGLEKLHDMIIKRRKMLRQQKKK 199


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,844,622
Number of Sequences: 237096
Number of extensions: 399019
Number of successful extensions: 671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)