Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30919
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   279   2e-75
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   277   6e-75
Z81576-1|CAB04643.2|  312|Caenorhabditis elegans Hypothetical pr...    33   0.16 
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AF077542-12|AAC26293.1|  169|Caenorhabditis elegans Hypothetical...    31   0.86 

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  279 bits (683), Expect = 2e-75
 Identities = 126/191 (65%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
 Frame = +3

Query: 174 AKRVVAAKPVVEMDGDEMTRIMWAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDS 353
           A + +    +VEM GDEMTRI+W  IKE+LI PYV ++  +FDLG+ HRDATDDQVTID+
Sbjct: 2   AAQKIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDA 61

Query: 354 AHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRV 533
           A+A LK+NV +KCATITPDE RVEEFKLKKMW SPNGTIRNILGGTVFREPI+ +++PR+
Sbjct: 62  ANATLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRL 121

Query: 534 VPGWTKPIVIGRHAHGDQYKAQDFVVPKPGKVELVYTTRDGT-TERRVLYDFKTPGVAMG 710
           V  W+KPI+IGRHAH DQYKA DFVVP  GK+E+ + + DGT T +  ++DFK PGV++ 
Sbjct: 122 VNTWSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLS 181

Query: 711 MYNTDESIRSF 743
           MYNTD+SIR F
Sbjct: 182 MYNTDDSIRDF 192


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  277 bits (679), Expect = 6e-75
 Identities = 127/203 (62%), Positives = 159/203 (78%), Gaps = 6/203 (2%)
 Frame = +3

Query: 153 LTRNYGTA-----KRVVAAKPVVEMDGDEMTRIMWAKIKERLIFPYVKVDCLYFDLGLPH 317
           L RN  TA     +++    PVV++DGDEMTRI+W +IK +LI PY+ +D  Y+DLGL +
Sbjct: 12  LARNVATAATQERQKIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEY 71

Query: 318 RDATDDQVTIDSAHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVF 497
           RD T+DQVTID+AHAIL+H+VGIKCATITPDE R++EF LKKMWLSPNGTIRNILGGTVF
Sbjct: 72  RDETNDQVTIDAAHAILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVF 131

Query: 498 REPILCQSIPRVVPGWTKPIVIGRHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVL 677
           REPILC++IPR+VPGWT+PI IGRHA GDQYK  D V+P    ++L+    DG+ +   +
Sbjct: 132 REPILCKNIPRLVPGWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNV 191

Query: 678 YDF-KTPGVAMGMYNTDESIRSF 743
           YDF K+ GV + MYNTDESI+ F
Sbjct: 192 YDFKKSGGVGLAMYNTDESIKGF 214


>Z81576-1|CAB04643.2|  312|Caenorhabditis elegans Hypothetical
           protein R10E8.1 protein.
          Length = 312

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 207 EMDGDEMTRIM-WAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDSAHAILKHNVG 383
           EMD D +T++  W +IK  LI  ++    L   L LP    T   +TI +   + KH +G
Sbjct: 170 EMDCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITMQSITIFNLKLLKKHFLG 229

Query: 384 IK 389
           +K
Sbjct: 230 LK 231


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 63  HEQW*IHEQYRNMANTSTTKILKCVNQFASLTRNYGTA-KRVVAAKPVVEM-DGDEMTRI 236
           ++QW I     N  NT+   + KC++ F    +NYG   KR+V    ++E+ D   +T  
Sbjct: 730 YQQWTIDTVQMNYQNTNLKYLPKCISIF---QKNYGDLNKRMVNFARIMEVGDNITITGH 786

Query: 237 MWAKIKERLIFPYVKVDCLY 296
           +W    E     YV +D  Y
Sbjct: 787 IWQNASESTFNLYVGMDPKY 806


>AF077542-12|AAC26293.1|  169|Caenorhabditis elegans Hypothetical
           protein Y57G7A.9 protein.
          Length = 169

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 330 DDQVTIDSAHAILKHNVGIKCATITPDEQRVE 425
           +DQ   +  H I K N GI+CA + P+ Q  E
Sbjct: 29  NDQYFQEVIHRICKRNEGIRCAMLAPNAQHAE 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,568,040
Number of Sequences: 27780
Number of extensions: 373905
Number of successful extensions: 854
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)