Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30918
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 97 9e-21
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 83 3e-16
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 77 1e-14
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 75 7e-14
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 68 7e-12
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 64 1e-10
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 60 1e-09
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 60 2e-09
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 47 1e-05
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 45 5e-05
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 45 7e-05
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 41 9e-04
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 38 0.011
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 36 0.032
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 33 0.23
01_07_0141 - 41390483-41391448 29 3.7
03_06_0136 + 31933843-31934715,31934906-31935021,31935233-319354... 28 6.4
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 97.5 bits (232), Expect = 9e-21
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA VFT+ LD AN + LR GT+WVN Y+VF VPFGG+K SG+GRE G Y LRNY
Sbjct: 508 GLAAGVFTQRLDAANTLARALRVGTVWVNTYDVFDAAVPFGGYKMSGVGREKGVYSLRNY 567
Query: 183 LEVKAVVVKLAD 218
L+ KAVV + D
Sbjct: 568 LQTKAVVTPIKD 579
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA VFT +L+ AN + LR GT+WVN ++VF +PFGG+KQSG+GRE G L+NY
Sbjct: 474 GLAAGVFTNNLNTANTLTRALRVGTVWVNCFDVFDAAIPFGGYKQSGIGREKGIDSLKNY 533
Query: 183 LEVKA 197
L++ A
Sbjct: 534 LQICA 538
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA + TK+L+ AN + +RAGT+WVN Y F PFGG+K SG GR+ G + Y
Sbjct: 440 GLAAGIVTKNLNIANMVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGMVAMDKY 499
Query: 183 LEVKAVVVKLAD 218
L+VK V+ + D
Sbjct: 500 LQVKTVITAVPD 511
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA + TK++D AN + +RAG IW+N Y F VPFGG+K SG G++ G L Y
Sbjct: 391 GLAAGIVTKNIDVANTVSRSIRAGAIWINCYLGFDPDVPFGGYKMSGFGKDMGMDALEKY 450
Query: 183 LEVKAVVVKL 212
L KAVV L
Sbjct: 451 LHTKAVVTPL 460
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 68.1 bits (159), Expect = 7e-12
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA + T+D+D AN + +RAG +WVN Y PFGG K SG G+++ + L +
Sbjct: 451 GLAAGLVTRDIDVANRMARSIRAGVVWVNCYFAMDRSCPFGGRKMSGFGKDDSMHALDKF 510
Query: 183 LEVKAVV 203
L VK+VV
Sbjct: 511 LAVKSVV 517
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/73 (41%), Positives = 44/73 (60%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLA AV + DL++ + +++G +W+N Q P+GG K+SG GRE G +GL NY
Sbjct: 422 GLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDNY 481
Query: 183 LEVKAVVVKLADK 221
L VK V +D+
Sbjct: 482 LSVKQVTKYCSDE 494
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLAA +FTK + ++ + L G + VN+ + PFGG KQSGLGRE YG+ Y
Sbjct: 484 GLAAYIFTKSIPRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEY 543
Query: 183 LEVKAVV 203
LEV +
Sbjct: 544 LEVSIAI 550
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNY 182
GLA AV + D ++ + + AG IWVN Q P+GG K+SG GRE G G+ NY
Sbjct: 441 GLAGAVLSGDRERCQRLTEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNY 500
Query: 183 LEVKAVVVKLADK 221
L VK V +D+
Sbjct: 501 LSVKQVTEYASDE 513
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGRENGPYGLR 176
GL AVF+ + +A +L G +ND+ + +PFGG K SG GR G GLR
Sbjct: 437 GLGCAVFSGNQKRAIKIASQLHCGVAAINDFASSYMCQSLPFGGVKDSGFGRFAGVEGLR 496
Query: 177 NYLEVKAVV 203
VKAVV
Sbjct: 497 ACCLVKAVV 505
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 6 LAAAVFTKDLDKANYFVQRLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGRENGPYGLRN 179
LAA +FTKD FV + AG + VND ++ +PFGG SG+G +G +
Sbjct: 381 LAAYLFTKDKKLQEEFVSNVPAGGMLVNDVALHLANPHLPFGGVGDSGIGSYHGKFSFDC 440
Query: 180 YLEVKAVVVK 209
+ KAV+++
Sbjct: 441 FTHKKAVLIR 450
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 6 LAAAVFTKDLDKANYFVQRLRAGTIWVNDYNV-FGNQ-VPFGGFKQSGLGRENGPYGLRN 179
LAA +FTKD + + AG + VND V NQ +PFGG +SG+G +G +
Sbjct: 352 LAAYLFTKDSKLQEQYEAAISAGGMLVNDTAVHLTNQYLPFGGVGESGMGAYHGRFSFEA 411
Query: 180 YLEVKAVVVK 209
+ KAV+V+
Sbjct: 412 FSHKKAVLVR 421
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 6 LAAAVFTKDLDKANYFVQRLRAGTIWVNDYNV-FG-NQVPFGGFKQSGLGRENGPYGLRN 179
LA FTK+ V+ +G++ ND V +G + +PFGG +SG G+ +G Y
Sbjct: 380 LAVYAFTKNAALRRRIVEETSSGSVTFNDAVVQYGIDSLPFGGVGESGFGQYHGKYSFEM 439
Query: 180 YLEVKAVVVK 209
+ KAV+ +
Sbjct: 440 FSHKKAVLTR 449
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 LAAAVFTKDLDKANYFVQRLRAGTIWVNDYNV-FG-NQVPFGGFKQSGLGRENGPYGLRN 179
LA FT + V +G++ ND V +G + VPFGG +SG G+ +G Y
Sbjct: 233 LAIYAFTNNEKLKQRIVAETSSGSVLFNDAIVQYGLDSVPFGGIGESGFGQYHGKYTFEL 292
Query: 180 YLEVKAVV 203
+ KAVV
Sbjct: 293 FSHRKAVV 300
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 35.9 bits (79), Expect = 0.032
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Frame = +3
Query: 3 GLAAAVFTKDLDKANYFVQRLRAGTIWVND----------YNVFGNQVPFG--GFKQSGL 146
GL VFTKD++KA + GT+ +N + +F + FG G K SG+
Sbjct: 421 GLQGCVFTKDINKAIMISDAMETGTVQINSAPARGPDHFPFQLFVISMGFGLQGLKDSGI 480
Query: 147 GRENGPYGLRNYLEVKAVVVKL 212
G + + +VK+ V+ L
Sbjct: 481 GSQGITNSINMMTKVKSTVINL 502
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 LAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFG--NQVPFGGFKQSGLGRENGPYGLRN 179
+A FT + V+ +G++ ND V VPFGG SG G+ +G Y
Sbjct: 308 IAMYAFTNNERLKRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSGFGQYHGKYSFEL 367
Query: 180 YLEVKAV 200
+ KAV
Sbjct: 368 FSHKKAV 374
>01_07_0141 - 41390483-41391448
Length = 321
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 81 WVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNYLEVKAVVVKLADKNT*AHNVQLVIQ* 260
++ YN G + F F SG ++G YG +N + + A NV++V+
Sbjct: 183 FIYSYNPGGMDISFALFTASGAVVQDGEYGYQNQFDATVDALYTAVAKLGGENVRVVVSE 242
Query: 261 IG 266
G
Sbjct: 243 TG 244
>03_06_0136 +
31933843-31934715,31934906-31935021,31935233-31935408,
31935846-31936036,31936119-31936205,31936304-31936461,
31936555-31936765,31936856-31937005
Length = 653
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 224 VLVGEFDDDGLDLEVVAES-VGPVLAAQPGLLEAAEGH 114
V VGE D DG DLEVV E G V+ G E EGH
Sbjct: 180 VAVGEGDVDGGDLEVVFEEWCGRVVRVVKG-EEIGEGH 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,956,889
Number of Sequences: 37544
Number of extensions: 274904
Number of successful extensions: 557
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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