Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30917
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 367 e-103
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 208 8e-55
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 201 1e-52
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 152 4e-38
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 33 0.056
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.074
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.13
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.23
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 30 0.40
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 29 0.52
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 27 3.7
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 4.9
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 8.5
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 25 8.5
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 367 bits (904), Expect = e-103
Identities = 171/245 (69%), Positives = 199/245 (81%)
Frame = +2
Query: 2 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 181
GN WAKGHYTEGAEL D+VLDVVR+E+E+CD LQGFQ KIRE
Sbjct: 98 GNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIRE 157
Query: 182 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 361
EYPDR+M T+SV P+PK SDTVVEPYNATLS+HQLVEN+DET+CIDNEAL I TLK+
Sbjct: 158 EYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKI 217
Query: 362 STPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 541
+P+Y DLNHLVS M+GVTT RFPG+LN+DLRKLAVNMVPFPRLHFFM GFAPL + G
Sbjct: 218 KSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIG 277
Query: 542 SRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKN 721
S ++A++VPELTQQMFDA NMM A DPRHGRYLTVAA+FRG++SMKEVDEQ+ ++Q KN
Sbjct: 278 SSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKN 337
Query: 722 SSYFV 736
S+YFV
Sbjct: 338 SAYFV 342
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 208 bits (507), Expect = 8e-55
Identities = 93/244 (38%), Positives = 148/244 (60%)
Frame = +2
Query: 5 NNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 184
NN+A+GHYT G E++DSVL+ +R+ +++C LQGF ++ E
Sbjct: 105 NNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNME 164
Query: 185 YPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLS 364
Y + +SV P+P+VS +VVEPYN+ L+ H ++N+D T+ +DNEA YDIC R L +
Sbjct: 165 YGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIE 224
Query: 365 TPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 544
PTY +LN L++ +S +T LRF G LN DL + N+VP+PR+HF + ++P+ S
Sbjct: 225 RPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAK 284
Query: 545 RQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 724
+ + +V E+T Q F+ N M CDPR GRY+ ++RG + ++V + +I+++ +
Sbjct: 285 AFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRT 344
Query: 725 SYFV 736
FV
Sbjct: 345 IQFV 348
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 201 bits (490), Expect = 1e-52
Identities = 93/244 (38%), Positives = 142/244 (58%)
Frame = +2
Query: 5 NNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 184
NN+A+GHYT G ELVD V D +R+ +++C LQGF ++ E
Sbjct: 101 NNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAME 160
Query: 185 YPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLS 364
Y + +SV P+P+VS +VVEPYN+ L+ H ++ D T+ +DNE+ YDIC R L +
Sbjct: 161 YTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNLDIE 220
Query: 365 TPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 544
P+Y +LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 221 RPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAK 280
Query: 545 RQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 724
+ + +V E+T Q F+ N M CDPR GRY+ ++RG + ++V + I+ K +
Sbjct: 281 AFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRT 340
Query: 725 SYFV 736
FV
Sbjct: 341 IQFV 344
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 152 bits (369), Expect = 4e-38
Identities = 77/250 (30%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Frame = +2
Query: 2 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 181
GNNWA G Y+ + + ++D++ +E++ D L+GF ++ +
Sbjct: 101 GNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLND 159
Query: 182 EYPDRIMNTYSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLK 358
YP +I+ TYSV P S VSD VV+PYN+ L++ +L N D +DN AL I L
Sbjct: 160 RYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLH 219
Query: 359 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 538
PT+ N LVS MS TT LR+PG +N DL + +++P PR HF + + P T++
Sbjct: 220 TQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQ 279
Query: 539 GSRQYRAL---TVPELTQQMFDAKNMMAACDP-RHGRYLTVAAIFRGRMSMKEVDEQMLN 706
+ +A+ TV ++ +++ KN M + +P + ++++ I +G +V + +L
Sbjct: 280 QVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLR 339
Query: 707 IQNKNSSYFV 736
I+ + + F+
Sbjct: 340 IRERRYASFI 349
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.7 bits (71), Expect = 0.056
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 2/165 (1%)
Frame = +3
Query: 39 LSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWA--PSSSQRSVKSTPTES*THT 212
L+S+ +S SA + L A ++ + S A + P+SS S + S T T
Sbjct: 375 LTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT 434
Query: 213 Q*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 392
S P S+ T S S + + T +AS+T L + +++ ++ P ++ +
Sbjct: 435 SASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNS 494
Query: 393 *FPSQCLVSPLALGSPVS*TLISENWP*TWFPSRVSTSSCQVSLP 527
+ +PL + + T +S P ++ S V +S S P
Sbjct: 495 TSATSASSTPLTSANSTTSTSVSSTAP-SYNTSSVLPTSSVSSTP 538
Score = 31.9 bits (69), Expect = 0.098
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +3
Query: 42 SSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVW-APSSSQRSVKSTP---TES*TH 209
SS + ++ SA + + Y S+L S + P+ A S++ S STP S T
Sbjct: 257 SSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTT 316
Query: 210 TQ*SPRPKYQTLSSNHTMRLSQFTS*LKT---QTKPTASTTRLYTTSASALSNCPHPPTV 380
T S P S+N T S ++ L + T +AS+T L + +++ ++ P
Sbjct: 317 TSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLT 376
Query: 381 TLTT*FPSQCLVSPLALGSPVS*TLISENWP*TWFPSRVSTSSCQVSLP 527
++ + + +PL + + T +S P ++ S V +S S P
Sbjct: 377 SVNSTSATSASSTPLTSANSTTSTSVSSTAP-SYNTSSVLPTSSVSSTP 424
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.074
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Frame = +3
Query: 39 LSSLTRSSM*SAKNQNLAIAYRASNLHIPSVA--APGPVWAPSSSQRSVKSTPTES*THT 212
L+S T SS+ S+ + + S+ S A + + SSS S S+P+ S + T
Sbjct: 170 LTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSST 229
Query: 213 Q*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 392
S ++ S + S +S + + TAS++ ++ S+ S+ PT T +T
Sbjct: 230 LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSST 289
Query: 393 *FPSQCLVSPLALGSPVS*TLISENWP*TWFPSRVSTS--SCQVSLPSHPVEADSTV 557
S S + + S T+ S + + F S +S+S S S S P + ST+
Sbjct: 290 ISSSS---SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.13
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 4/168 (2%)
Frame = +3
Query: 105 ASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS 284
+S+L P + P + SS+ + T T S T T SP P T + T + +S
Sbjct: 184 SSSLSTP-ITPTVPPTSTSSTSIPIPPTSTSS-TDTNSSPLPTTSTSCTTSTSIPTGGSS 241
Query: 285 *LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT*FPSQCLVSPLALGSPVS*TLI-- 458
L T PT T +TS++++ P PPT T +T S L P S + T I
Sbjct: 242 SLSTPITPTVPPT---STSSTSI---PIPPTSTSSTDTNSSPL--PTTSTSCTTSTSIPP 293
Query: 459 --SENWP*TWFPSRVSTSSCQVSLPSHPVEADSTVP*LYPSSHNRCST 596
+ P T STSS P + T PS+ C+T
Sbjct: 294 TGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTT 341
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.7 bits (66), Expect = 0.23
Identities = 26/115 (22%), Positives = 58/115 (50%)
Frame = +3
Query: 3 ATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 182
+TT ++ SS T ++ S+ + + + + +S+ S ++ + SSS S
Sbjct: 134 STTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193
Query: 183 STPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSAS 347
S+ + S + + S P + SS+H+ S +S + ++P++S++ + T S+S
Sbjct: 194 SSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS-SSSSSRPSSSSSFITTMSSS 247
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 29.9 bits (64), Expect = 0.40
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +3
Query: 15 PRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPT 194
PR++T++ L S++ S S+ Q + +S L+ PS AP P + SSS T
Sbjct: 219 PRESTEKPLLSVSALSS-SSHLQPTSATSSSSRLY-PSRPAPTPPASSSSSPLLSSQTVK 276
Query: 195 ES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRL 329
+ ++ P P + S+++ +R S L QT T+ T +
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIR-SHSPVLLTPQTLSTSETKHI 320
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 29.5 bits (63), Expect = 0.52
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 294 TQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 392
T T +T + TTS S ++CP P T+ + T
Sbjct: 166 TSTSCNPATVLIVTTSGSTSTSCPPPTTILIVT 198
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 14 AKGHYTEGAELVDSVLDVVRKESESCDCLQ 103
A+GH G ELV + D +RK+SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 26.6 bits (56), Expect = 3.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 281 QLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 460
Q+ NTD + N LY RT+ DLN SL + GV +F G + +
Sbjct: 301 QVCTNTDSSRNAGNAILYQ-AVRTIL-------DLNSDSSLRVLGVNILAKFLGNRDNNT 352
Query: 461 RKLAVNMV 484
R +A+NM+
Sbjct: 353 RYVALNML 360
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 87 LAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 182
LA+ Y + + +V APG +W+P+ +R K
Sbjct: 159 LAVRYGPLGIRV-NVCAPGTIWSPAWDERFKK 189
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 8.5
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +3
Query: 126 SVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTK 305
S A P SSS S STP S + S SS+ + S ++ KT +
Sbjct: 145 STATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSA 204
Query: 306 PTASTTRLYTTSASALSN 359
+ ST ++TS ++ S+
Sbjct: 205 SSNSTISGFSTSTTSASS 222
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 8.5
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 339 SASALSNCPHPPTVTLTT*FPSQCLVSPLALGSPVS*TLISENW--P*TWFPS---RVST 503
+A +LS CP PT L++ + +V + G + S NW +W PS RV+
Sbjct: 262 AALSLSWCPEDPTFLLSSGKDGRAMVWNVETGESLGSFPRSGNWYTKSSWCPSNSNRVAV 321
Query: 504 SSCQVSLPSHPVEADST 554
+S + + +++ +T
Sbjct: 322 ASLEGKVSIFSIQSTNT 338
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 228 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPH 368
PK T H +S T +K+ S+TRL + S S PH
Sbjct: 664 PKTNTEGLMHAQSVSPITQAMKSANVLEGSSTRLNSYEPSVSSAYPH 710
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,029,530
Number of Sequences: 5004
Number of extensions: 63614
Number of successful extensions: 238
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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