Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30914
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0606 + 19912090-19913430 31 0.81
09_02_0356 + 7742926-7742937,7743008-7743040,7743704-7743758,774... 30 1.9
11_06_0313 + 22306497-22308938 29 3.3
09_04_0321 - 16664316-16664939,16665369-16666262 28 5.7
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 28 5.7
07_01_0038 + 305083-305350,305487-305887 28 5.7
04_04_0051 - 22371490-22371658,22372333-22372778,22373880-223740... 28 5.7
01_05_0612 - 23652121-23652400,23653031-23654427 28 5.7
04_03_0917 + 20798977-20801369,20801578-20801581 28 7.5
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 28 7.5
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 27 9.9
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 27 9.9
03_05_0349 + 23356871-23356907,23356995-23357063,23357236-233574... 27 9.9
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 9.9
01_06_1740 - 39575614-39576981 27 9.9
>07_03_0606 + 19912090-19913430
Length = 446
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 405 QDERCCSKLCWYYCVRCRGHCQLFVCYNWDDG*FCSID 292
QD + CW C GHC L NWDDG F ++
Sbjct: 128 QDRPHDEQQCWDVMEICGGHCLLM---NWDDGLFAVLN 162
>09_02_0356 +
7742926-7742937,7743008-7743040,7743704-7743758,
7744137-7745530
Length = 497
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = +1
Query: 142 GIGVSGGRLAVETFLTRDLFF------PLLIAHSVIKRVH 243
G+GV GG AV+ F RD+F+ P I V + +H
Sbjct: 178 GVGVGGGGRAVDIFAVRDVFYLLENQIPFFILEKVYELIH 217
>11_06_0313 + 22306497-22308938
Length = 813
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -2
Query: 164 LPPLTPIPCK--QQRNNTGVPVNGGCRATNNPLGVCWN-SCHSS 42
+PP+T + Q + N + +N GCR + N L CW+ C S
Sbjct: 770 IPPMTELTYDYGQSQGNVQLGINSGCRKSKNCL--CWSRKCRGS 811
>09_04_0321 - 16664316-16664939,16665369-16666262
Length = 505
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 31 PLVWLLWQLFQQTPKGLLVARQPPLTGTP 117
PL++LLW ++P G A PP TP
Sbjct: 18 PLLYLLWSKASKSPSGAPAAPPPPPGPTP 46
>09_02_0308 +
7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 493 VRSSFVT--FRSGLSIRIPAPNVTDPLTVLSPLTCCALV 603
V S F T F + +RI N+ +P VL+P CC +
Sbjct: 426 VGSEFATSLFAGDVKLRIWRHNIDNPCAVLAPEACCLTI 464
>07_01_0038 + 305083-305350,305487-305887
Length = 222
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 47 CGSCSNKPPKDYWWLDNHH*PVPRYCFSVVYKELESVVAGLR 172
C + ++P + WWL PVP+ +V KEL + G R
Sbjct: 63 CAATDDEPANNGWWLTEFPLPVPK----IVNKELNNGETGSR 100
>04_04_0051 -
22371490-22371658,22372333-22372778,22373880-22374054,
22374134-22374240,22374358-22374646,22374942-22375075,
22375228-22375423,22375611-22375719,22375839-22375965
Length = 583
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 448 LFGLLVGVLLRSEV-LVRSSFVTFRSGLSIRIPAPNVTDPL--TVLSPLTCCALVFWTLV 618
L GL+V + L + + L++S ++ F+ + + P TV P+ A++FW LV
Sbjct: 201 LLGLIVDIPLYTVIALIKSPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLV 260
Query: 619 VATS 630
V S
Sbjct: 261 VVGS 264
>01_05_0612 - 23652121-23652400,23653031-23654427
Length = 558
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 258 GSTWANSGGVVHQLNRIIH--HPNYNRQTADSD 350
G T A S ++R++ HPN NRQT DSD
Sbjct: 64 GITVAFSAAAPPAISRLLFALHPNKNRQTTDSD 96
>04_03_0917 + 20798977-20801369,20801578-20801581
Length = 798
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 151 VSGGRLAVETFLTRD--LFFPLLIAHSVI 231
+SG R + + F TRD +FPLL+AH ++
Sbjct: 696 ISGTRNSSKEFATRDDYEYFPLLVAHKLL 724
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 26 VGPWSGCCGSCSNK-PPK 76
VG +GCC SC N+ PPK
Sbjct: 335 VGKSTGCCDSCGNRVPPK 352
>07_03_1424 -
26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 264 WNQHEDAMHPFDHRMCNEQRKEQISG 187
W H D M FDH C +E++ G
Sbjct: 173 WTGHPDTMFTFDHVACETISQEKLFG 198
>06_03_0191 -
17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 107 PVPRYCFSVVYKELESVVAGLRWKPS*PEIC 199
P+P F + +LESVVA R KP +C
Sbjct: 11 PIPLSRFGALVAQLESVVASARQKPPDALLC 41
>03_05_0349 +
23356871-23356907,23356995-23357063,23357236-23357424,
23358148-23358249,23358451-23358582,23359499-23359638,
23360169-23360252,23360608-23360748,23361815-23361916,
23362239-23362409,23362452-23362571
Length = 428
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 464 LGCYFARRFWFGAASSRSGLDYQSEYLRPTL 556
+ C+F +RFW A + + GL QS R +L
Sbjct: 107 VSCFFNKRFWPNAQTHKGGLARQSTPGRTSL 137
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 459 AGWGATSLGGSGSEQLRHVQVWTINQNTCAQRY 557
AGW ++ S ++HVQ+W + +T + R+
Sbjct: 144 AGWPLNNMESSYKFMVKHVQLWKVAFHTTSPRW 176
>01_06_1740 - 39575614-39576981
Length = 455
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 586 TCCALVFWTLVVATSARVTPVVL 654
T C ++FW LV+A A V + L
Sbjct: 270 TACCILFWLLVIAVGAAVLVIFL 292
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,298,289
Number of Sequences: 37544
Number of extensions: 517332
Number of successful extensions: 1574
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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