Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30914
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 89 3e-18
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 76 3e-14
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 49 3e-06
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 31 0.54
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.3
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 30 1.7
U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical pr... 30 1.7
U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40422-1|AAA81444.1| 102|Caenorhabditis elegans Neuropeptide-li... 28 5.1
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 5.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.1
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 27 8.9
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 27 8.9
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 27 8.9
AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein. 27 8.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 89.0 bits (211), Expect = 3e-18
Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Frame = +3
Query: 63 TNPQRIIGGSTTTIDRYPGIVSLLFTRNWSQWWQACGGNLLNQRSVLSAAHCTFGD-QTG 239
T R+IGGS ++ +P V LL + CGG+L++ VL+AAHC D +
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 240 AWRLRVGSTWANSGGVVHQLNRIIHHPNYNRQTADS-DLCILRSNTNIVLNNNVRPVNIA 416
++ +RVG + SG H++ + HP YN S D I+R + + + RP+ +
Sbjct: 109 SYSVRVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICL- 166
Query: 417 GSNYNLADNQPVWAAGWGATSLGGS-GSEQLRHVQVWTINQNTCAQRYRPINRSITANML 593
+ +N+ GWG+T G S + LR + V ++ C+ I R +ML
Sbjct: 167 -PSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 594 CSGVLDVGGRDQCQGDSGGPL 656
C+G G D CQGDSGGPL
Sbjct: 226 CAG-YSYGKIDSCQGDSGGPL 245
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 75.8 bits (178), Expect = 3e-14
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Frame = +3
Query: 75 RIIGGSTTTIDRYPGIVSLLFTRNWSQWWQACGGNLLNQRSVLSAAHCTFGDQ-TGAWRL 251
R++GG T +P +L RN + CG ++L++ +++AAHC D+ ++ +
Sbjct: 26 RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 252 RVGSTWANS----GGVVHQLNRIIHHPNYNRQTADSDLCILR-SNTNIVLNNNVRPVNIA 416
VG W N+ + L RI +P Y + D+ IL I N +P+ +
Sbjct: 83 VVGD-WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLP 140
Query: 417 GSNYNLADNQPVWAAGWGATSLGGSGSEQLRHVQVWTINQNTCAQRYRPINRSITANMLC 596
++ + +GWG S+G +E+L+ + IN+ C + I S++ + C
Sbjct: 141 SKDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFC 197
Query: 597 SGVLDVGGRDQCQGDSGGP 653
+G L+ GG D CQGDSGGP
Sbjct: 198 AGYLE-GGIDSCQGDSGGP 215
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 48.8 bits (111), Expect = 3e-06
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Frame = +3
Query: 75 RIIGGSTTTIDRYPGIVSLLFTRNWSQWWQACGGNLLNQRSVLSAAHCTFGDQTGAWRLR 254
RIIGG++ ID ++ L + + CG +++ +++AAHC QT ++ +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSF-VY 93
Query: 255 VGSTWANSGGVVHQLNRIIHHPNYNRQTADSDLCILRSNTNIVLNNNVRPVNIAGSNYNL 434
V N+ + H YN QTAD+D+ +LR ++++ ++PV + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDL-SKLGIKPVCLVHDDSKL 151
Query: 435 ADNQPVWAA-GWGATSLG--GSG------SEQLRHVQVWTINQNTCAQRYR---PINRSI 578
G+G T LG SG S+ L+ V I+ + C + +R ++ I
Sbjct: 152 LKQYKNGVVIGYGLT-LGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKI 210
Query: 579 TANMLCSGVLDVGGRDQCQGDSGGPL 656
T +C+G G GDSGGPL
Sbjct: 211 TGYQICAGAYLHG---TAPGDSGGPL 233
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 429 NLADNQPVWAAGWGATSLGGSGSEQLRHVQVWTINQNTCAQRYRPINRSITANMLCSGVL 608
N+ V + GWG+ G + +QV T+ T A SI + C+
Sbjct: 205 NIQSGANVTSFGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENWGTSIPFDSFCTA-- 262
Query: 609 DVGGRDQCQGDSGGPL 656
+ ++ C GDSGG L
Sbjct: 263 EEEDKNVCSGDSGGGL 278
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 168 CGGNLLNQRSVLSAAHC 218
CGG L+ + VL+AAHC
Sbjct: 62 CGGTLITLKHVLTAAHC 78
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +2
Query: 29 GPWSGCCGSCSNKPPKDYWWLDNHH*PVP-RYCFSVVYKELESVVAGLR----WKPS*PE 193
GPW+ C +C N + +H +P YC + + KE+ + LR WK + E
Sbjct: 1374 GPWTACSATCGNGTQRRLLKCRDHVRDLPDEYC-NHLDKEVSTRNCRLRDCSYWKMAEWE 1432
Query: 194 ICSFRCSLHIR 226
C C H++
Sbjct: 1433 ECPATCGTHVQ 1443
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +2
Query: 29 GPWSGCCGSCSNKPPKDYWWLDNHH*PVP-RYCFSVVYKELESVVAGLR----WKPS*PE 193
GPW+ C +C N + +H +P YC + + KE+ + LR WK + E
Sbjct: 1374 GPWTACSATCGNGTQRRLLKCRDHVRDLPDEYC-NHLDKEVSTRNCRLRDCSYWKMAEWE 1432
Query: 194 ICSFRCSLHIR 226
C C H++
Sbjct: 1433 ECPATCGTHVQ 1443
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 75 RIIGGSTTTIDRYPGIVSL-LFT--RNWSQWWQA-CGGNLLNQRSVLSAAHC 218
+I G ID P V + +T +N + W C G L + R +L+A HC
Sbjct: 40 KIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91
>U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.7 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 27/35 (77%)
Frame = -2
Query: 389 VQNYVGITA*DAEVTVSCLSVIIGMMDNSVQLMHN 285
++++V ITA ++T+SC+S IG++ SVQ++++
Sbjct: 49 IRDFVQITA-GVDLTLSCVSFTIGVVITSVQILNS 82
>U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical
protein K08D10.5 protein.
Length = 602
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -1
Query: 471 HPN-QQPKQVGYQQDCNWNQ 415
HPN QQ K+ YQ+ CNW++
Sbjct: 561 HPNVQQAKRGRYQRSCNWSR 580
>U40422-1|AAA81444.1| 102|Caenorhabditis elegans Neuropeptide-like
protein protein22 protein.
Length = 102
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 231 QTGAWRLRVGSTWANSGGVVHQL--NRIIHHPNYNRQTADSDLCILRSNTNIVLNNNV 398
QT A L+ G GVV Q+ N+I+H NY R T + L R T ++ ++
Sbjct: 21 QTSALGLQGGIDVFRGLGVVDQVDFNQILHRANYLRNTREGRLRYWRLRTLPIMKKSI 78
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 168 CGGNLLNQRSVLSAAHCTFG-DQTGAWRL 251
C G +++ R +L A HC G ++ G+W L
Sbjct: 193 CTGTIVSPRHILIATHCFAGQNRDGSWNL 221
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 158 PLTPIPCKQQR--NNTGVPVNGGCRATNNPLGVCWNSCHSSQTKG 30
P++ PC+QQ+ NN G GGC N C C+S + G
Sbjct: 2115 PISFNPCQQQQQQNNCGGGCGGGCSGGGNS---CGGGCNSGGSCG 2156
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 236 GCMAS-SCWFHLGQQWGCC 289
GC A+ C+F G QWGCC
Sbjct: 606 GCPANYECYFD-GSQWGCC 623
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 420 SNYNLADNQPVWAAGWGATSLGGSGSEQLRHVQVWTINQNTCAQRYRPINRSITAN 587
SN L +++ V G GAT + G + +L VW + + R+I AN
Sbjct: 25 SNQELIEDKLVLEIGAGATGVCGLTTAKLGAANVWMTDHPKLEAALETLQRNIEAN 80
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +3
Query: 528 INQNTCAQRYRPINRSITANMLCSGVLDVGGRDQCQGDSGGPL 656
+NQNT Q Y P N + N C+ + C P+
Sbjct: 246 MNQNTNTQMYNPYNTNTNQNANCAPACQPACDNSCTSQQAQPV 288
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 528 INQNTCAQRYRPINRSITANMLCSGVLDVGGRDQCQGDSGGPL 656
+NQNT Q Y P N + + N C+ + C P+
Sbjct: 246 MNQNTNTQMYNPYNTNTSQNANCAPACQPACDNSCTSQQTQPM 288
>AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein.
Length = 323
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 230 ITECAMSSGKNRSLVKKVSTASLPPLTPIPCKQQRN-NTGVPVNGGCR 90
I+ MS+ N S V + +S PPL PIP + RN NT + N R
Sbjct: 150 ISSRRMSNTSNTSSVFGLKYSS-PPLMPIPSARDRNSNTSLASNFSIR 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,209
Number of Sequences: 27780
Number of extensions: 408630
Number of successful extensions: 1180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -