Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30912
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    30   1.3  
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 417  NYYIVCKYDSNEFTINLTNVNILKDSLSLCV*IKKMSLCNKRSRLNCVVT 566
            N  I  KY +NE T+N+TN+ +  +    C  + +  +  K  +L  + T
Sbjct: 2804 NGVITSKYAANEKTLNVTNIQLDDEGFYYCTAVNEAGITKKFFKLIVIET 2853


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 417  NYYIVCKYDSNEFTINLTNVNILKDSLSLCV*IKKMSLCNKRSRLNCVVT 566
            N  I  KY +NE T+N+TN+ +  +    C  + +  +  K  +L  + T
Sbjct: 2804 NGVITSKYAANEKTLNVTNIQLDDEGFYYCTAVNEAGITKKFFKLIVIET 2853


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 417  NYYIVCKYDSNEFTINLTNVNILKDSLSLCV*IKKMSLCNKRSRLNCVVT 566
            N  I  KY +NE T+N+TN+ +  +    C  + +  +  K  +L  + T
Sbjct: 2804 NGVITSKYAANEKTLNVTNIQLDDEGFYYCTAVNEAGITKKFFKLIVIET 2853


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 417  NYYIVCKYDSNEFTINLTNVNILKDSLSLCV*IKKMSLCNKRSRLNCVVT 566
            N  I  KY +NE T+N+TN+ +  +    C  + +  +  K  +L  + T
Sbjct: 2804 NGVITSKYAANEKTLNVTNIQLDDEGFYYCTAVNEAGITKKFFKLIVIET 2853


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 417  NYYIVCKYDSNEFTINLTNVNILKDSLSLCV*IKKMSLCNKRSRLNCVVT 566
            N  I  KY +NE T+N+TN+ +  +    C  + +  +  K  +L  + T
Sbjct: 2804 NGVITSKYAANEKTLNVTNIQLDDEGFYYCTAVNEAGITKKFFKLIVIET 2853


>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
           protein F46C3.3 protein.
          Length = 2557

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = -3

Query: 535 LHNDIFFIQTHRDRESFNIFTLVKFIVNSFESYLQTI**FILMMLGDVVVSYSKEFSIKI 356
           LH  +  I  H   E +N   + +F++NS    ++ +  F+     D ++ Y+K+  I +
Sbjct: 348 LHTGVISILDHYGFEKYNNNGVEEFLINSVNERIENL--FVKHCFHDQLIDYAKD-GISV 404

Query: 355 D 353
           D
Sbjct: 405 D 405


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 403 LGDVVVSYSKEFSIKIDRTKHELNI*KKPSLNLKDDFS*T 284
           +GD+   Y +   I ID+ +HEL   +K  LN+ ++ + T
Sbjct: 160 VGDLFHQYDRSIEI-IDKVRHELTSTEKDQLNMMENLNDT 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,202,740
Number of Sequences: 27780
Number of extensions: 277851
Number of successful extensions: 578
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)