Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30905
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   3.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   3.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 490 EADVIGIHKPGKPKNHPTSYRPISLLMS 573
           ++DV+ + KPG P +      P+ L +S
Sbjct: 220 DSDVVNLSKPGTPPSGEPGNGPLDLSVS 247


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 166 DDDEKAELLADTLQTQCTPSTQ 231
           D  E    LAD LQT C+  +Q
Sbjct: 57  DGQELKNNLADALQTSCSKCSQ 78


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 166 DDDEKAELLADTLQTQCTPSTQ 231
           D  E    LAD LQT C+  +Q
Sbjct: 57  DGQELKNNLADALQTSCSKCSQ 78


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 667 TNHSCVQQVHRLTEHILV 720
           TN+S VQ++HR    I V
Sbjct: 238 TNYSAVQEMHRKGHEIAV 255


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 478 AVWKEADVIGIHKPG 522
           AV++   ++G+H+PG
Sbjct: 192 AVYEPVRIMGVHRPG 206


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 667 TNHSCVQQVHRLTEHILV 720
           TN+S VQ +HR    I V
Sbjct: 230 TNYSAVQDLHRRGHEIAV 247


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 667 TNHSCVQQVHRLTEHILV 720
           TN+S VQ +HR    I V
Sbjct: 237 TNYSAVQDLHRRGHEIAV 254


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 431 CWHLFSMPLWRTV 469
           CW  F   LWR++
Sbjct: 393 CWAQFKAVLWRSI 405


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 431 CWHLFSMPLWRTV 469
           CW  F   LWR++
Sbjct: 393 CWAQFKAVLWRSI 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,252
Number of Sequences: 336
Number of extensions: 3651
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)