Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30905
(749 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 144 2e-34
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 109 4e-24
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 109 5e-24
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 107 2e-23
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 107 2e-23
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 103 2e-22
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 99 3e-21
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 99 6e-21
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 99 6e-21
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 98 1e-20
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 97 2e-20
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 97 2e-20
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 94 2e-19
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 87 2e-17
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 70 4e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 68 1e-11
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 59 6e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 56 5e-08
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 45 1e-04
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 31 2.2
U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein ... 30 3.9
BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p pro... 30 3.9
BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p pro... 30 3.9
AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich... 30 3.9
AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC... 30 3.9
AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB... 30 3.9
AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA... 30 3.9
AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD... 30 3.9
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 144 bits (348), Expect = 2e-34
Identities = 84/215 (39%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Frame = +1
Query: 76 SYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVE 255
S ++ ++LK +P + P G LA +++E+A A+ L+T+ T + + E
Sbjct: 362 SLWKCTKSLKRQPFRQVP-IRCPGGELAK-NEEEQANCFANHLETRFTHFQFATTEQYQE 419
Query: 256 LVDS-EVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVM 432
+DS E + SLP + P+ E+ + IK L +K+PG D + N +K LPV+ I+
Sbjct: 420 TLDSLETPLQMSLP----IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILY 475
Query: 433 LASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXX 612
LA I+NA + FP WK A ++ IHKPGKP+ P SYRPISLL S
Sbjct: 476 LALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRL 535
Query: 613 XDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 717
D ++ + IL D QFGFR HS V+QVHRLT+HIL
Sbjct: 536 NDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHIL 570
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 109 bits (262), Expect = 4e-24
Identities = 72/215 (33%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Frame = +1
Query: 76 SYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCTP-STQSVDPVHV 252
S ++ R +K PLV +G D + AE+ A L + P S+ V
Sbjct: 361 SLWKATRAIKR-RCTRKAPLVDSNGTWCRTDLGQ-AEVFAAHLAERFQPFKLASLQQVE- 417
Query: 253 ELVDSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVM 432
+++ + +L + P P EV ++I KAPG D I N +K LP Q I+
Sbjct: 418 ---ETQDQLNQALQMDMPITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILY 474
Query: 433 LASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXX 612
+ +FNA + FP WK + IHKPGKP+ P SYRPISLL S
Sbjct: 475 ITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRI 534
Query: 613 XDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 717
+ ++GI + QFGFR H V+Q+HR+ E IL
Sbjct: 535 VSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQIL 569
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 109 bits (261), Expect = 5e-24
Identities = 76/226 (33%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Frame = +1
Query: 46 FLEGLAPSQRSY--YRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCT 219
++E L+P+ Y +R R LK+ MP L PSG D+E+A AD LQ
Sbjct: 348 YIEQLSPTSTKYPLWRAHRNLKTPIAPIMP-LRSPSGTWFR-SDEERASAFADHLQNVFR 405
Query: 220 PSTQSVDPVHVELVDSEVERRASLPPSDALPPVTPMEVKDLIKD-LRPRKAPGSDGISNR 396
P+ + + L+ A+L P + P E+ +IK+ L PRK+PG D I+ R
Sbjct: 406 PNPSTNTFILPPLI------AANLDPQEPFE-FRPCELAKVIKEQLNPRKSPGYDLITPR 458
Query: 397 VIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSX 576
++ LP I+ + +FNA FP WK++ ++ I KPGK K P+SYRPISLL
Sbjct: 459 MLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCL 518
Query: 577 XXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
+ L QFGFR H ++QV+R+T I
Sbjct: 519 SKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 107 bits (257), Expect = 2e-23
Identities = 79/234 (33%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Frame = +1
Query: 25 RDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPP--LVGPSGRLAAFDDDEKAELLAD 198
+ A+ FL+ L + Y L R K P + PSG EK E+ A+
Sbjct: 145 KQAQIDTFLDNLGADASTNYSLWRITKRFKAQPTPKSAIKNPSGGWCR-TSLEKTEVFAN 203
Query: 199 TLQTQCTPSTQSVDPVHVELVDS-EVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPG 375
L+ + TP + + + ++ + E + SLPPS VT EVK+LI L +KAPG
Sbjct: 204 NLEQRFTPYNYAPESLCRQVEEYLESPFQMSLPPS----AVTLEEVKNLIAKLPLKKAPG 259
Query: 376 SDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRP 555
D + NR I+LLP Q + L IFN+ + FP WK A +I IHK GK SYRP
Sbjct: 260 EDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRP 319
Query: 556 ISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 717
ISLL S + QFGFR H +Q+HR+ L
Sbjct: 320 ISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 373
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 107 bits (257), Expect = 2e-23
Identities = 76/226 (33%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Frame = +1
Query: 46 FLEGLAPSQRSY--YRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCT 219
++E L+P+ Y +R R LK+ MP L PSG D+E+A AD LQ
Sbjct: 348 YIEQLSPTSTKYPLWRAHRNLKTPIAPIMP-LRSPSGTWFR-SDEERACAFADHLQNVFR 405
Query: 220 PSTQSVDPVHVELVDSEVERRASLPPSDALPPVTPMEVKDLIKD-LRPRKAPGSDGISNR 396
P+ + + L+ A+L P + P E+ +IK+ L PRK+PG D I+ R
Sbjct: 406 PNPSTNTFILPPLI------AANLDPQEPFE-FRPCELAKVIKEQLNPRKSPGYDLITPR 458
Query: 397 VIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSX 576
++ LP I+ + +FNA FP WK++ ++ I KPGK K P+SYRPISLL
Sbjct: 459 MLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCL 518
Query: 577 XXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
+ L QFGFR H ++QV+R+T I
Sbjct: 519 SKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 103 bits (248), Expect = 2e-22
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Frame = +1
Query: 25 RDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPP--LVGPSGRLAAFDDDEKAELLAD 198
+ A+ FL+ L + Y L R K P + PSG EK E+ A+
Sbjct: 343 KQAQIDTFLDNLGADASTNYSLWRITKRFKAQPTPKSAIKNPSGGWCR-TSLEKTEVFAN 401
Query: 199 TLQTQCTPSTQSVDPVHVELVDS-EVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPG 375
L+ + TP + + + ++ + E + SLP L VT EVK+LI L +KAPG
Sbjct: 402 NLEQRFTPYNYAPESLCRQVEEYLESPFQMSLP----LSAVTLEEVKNLIAKLPLKKAPG 457
Query: 376 SDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRP 555
D + NR I+LLP Q + LA IFN+ + FP WK A +I IHK GK SYRP
Sbjct: 458 EDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRP 517
Query: 556 ISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 717
SLL S + QFGFR H +Q+HR+ L
Sbjct: 518 TSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 571
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 99 bits (238), Expect = 3e-21
Identities = 58/157 (36%), Positives = 79/157 (50%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R +L + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERHNLNKNPHNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 523 IYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKV 582
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 583 DLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFER 619
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 99.1 bits (236), Expect = 6e-21
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Frame = +1
Query: 1 VKSRITEVRDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEK 180
++ + +A+W++ L+ L + ++ + + +K + P + + + A EK
Sbjct: 358 IRKELFIYNNAKWNNKLQKLDKCSKPFWNITKAIKKRKQIV--PCLSKADEIYA-SGKEK 414
Query: 181 AELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-LPPVTPMEVKDLIKDLR 357
A +LAD Q + + + ++ V ++ A P + A + VT EV ++K L
Sbjct: 415 ANILADVFQLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALH 474
Query: 358 PRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNH 537
RK+PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP ++
Sbjct: 475 TRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDN 534
Query: 538 PTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
P SYRPISLL F+ L Q+GFR + + +L +I
Sbjct: 535 PESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYI 593
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 99.1 bits (236), Expect = 6e-21
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Frame = +1
Query: 1 VKSRITEVRDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEK 180
++ + +A+W++ L+ L + ++ + + +K + P + + + A EK
Sbjct: 306 IRKELFIYNNAKWNNKLQKLDKCSKPFWNITKAIKKRKQIV--PCLSKADEIYA-SGKEK 362
Query: 181 AELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-LPPVTPMEVKDLIKDLR 357
A +LAD Q + + + ++ V ++ A P + A + VT EV ++K L
Sbjct: 363 ANILADVFQLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALH 422
Query: 358 PRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNH 537
RK+PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP ++
Sbjct: 423 TRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDN 482
Query: 538 PTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
P SYRPISLL F+ L Q+GFR + + +L +I
Sbjct: 483 PESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYI 541
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 97.9 bits (233), Expect = 1e-20
Identities = 57/157 (36%), Positives = 79/157 (50%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R +L + P+T E+ + IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 475 ESMLTERHNLNKNPHNQPITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 534
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 535 IYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRV 594
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 595 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 631
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/157 (36%), Positives = 78/157 (49%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 347 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 406
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 407 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 466
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 467 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 503
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/157 (36%), Positives = 78/157 (49%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 619
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/157 (36%), Positives = 78/157 (49%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLIL 522
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 619
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/157 (36%), Positives = 78/157 (49%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 425 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 484
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 485 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 544
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 545 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 581
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/157 (36%), Positives = 78/157 (49%)
Frame = +1
Query: 262 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLAS 441
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 442 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDF 621
I+N+ + +P WK A V I KPGK N P SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 622 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNR 732
K + QFGFR H QQ+ R+T+ IL R
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFER 619
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 65/187 (34%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Frame = +1
Query: 172 DEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 336
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 337 DLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 516
LI L +KAPG+D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 517 PGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVH 696
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 697 RLTEHIL 717
R+T+ IL
Sbjct: 611 RVTQFIL 617
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 65/187 (34%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Frame = +1
Query: 172 DEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 336
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 337 DLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 516
LI L +KAPG+D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 517 PGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVH 696
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 697 RLTEHIL 717
R+T+ IL
Sbjct: 611 RVTQFIL 617
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 65/187 (34%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Frame = +1
Query: 172 DEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 336
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 337 DLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 516
LI L +KAPG+D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 517 PGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVH 696
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 697 RLTEHIL 717
R+T+ IL
Sbjct: 611 RVTQFIL 617
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 93.9 bits (223), Expect = 2e-19
Identities = 74/227 (32%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Frame = +1
Query: 46 FLEGLAPS---QRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQC 216
++E L P+ Q+S +R TL+ T T+ P+ SG A D+D +A A LQ
Sbjct: 349 YIEQLTPTGTKQKSLWRAHSTLRPPTE-TVLPIKNSSGGWARSDED-RANTFAAHLQNVF 406
Query: 217 TPSTQSVDPVHVELVDSEVERRASLPPSDALPPVTPMEVKDLIKD-LRPRKAPGSDGISN 393
TP+ + L V R P P E+ +IKD L P+K+PG D I+
Sbjct: 407 TPNQATST---FALPSYPVNRHQQHTPI----VFRPKEITKIIKDNLSPKKSPGYDLITP 459
Query: 394 RVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMS 573
+I LP + + +FNA FP WK +I I KPGK +SYRPISLL
Sbjct: 460 EMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSC 519
Query: 574 XXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
+ I+ QFGFR +H ++QV+R+T I
Sbjct: 520 ISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEI 566
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 87.4 bits (207), Expect = 2e-17
Identities = 56/160 (35%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Frame = +1
Query: 253 ELVDSEVERRASLPPSDA-----LPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPV 417
E V +E+++ SL S PVT E+ LI L +KAPG+D ++N+ I LP
Sbjct: 11 EFVRNELDKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPT 70
Query: 418 QLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXX 597
+ + L I+N + FP WK A + I KPGK SYRPISLL
Sbjct: 71 KARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERI 130
Query: 598 XXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 717
D S + QFGFR +H Q+ R+T+ IL
Sbjct: 131 LLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 170
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 69.7 bits (163), Expect = 4e-12
Identities = 40/139 (28%), Positives = 61/139 (43%)
Frame = +1
Query: 292 PPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCI 471
PP+ P +T EV + K +RP KAPG DGI ++K + F + + +
Sbjct: 394 PPASDFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGV 453
Query: 472 FPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 651
FP WK+ ++ + K P N P SYRP+ LL S L +
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQ 513
Query: 652 QFGFRTNHSCVQQVHRLTE 708
Q+GFR S + + +T+
Sbjct: 514 QYGFRKGKSTLDALKSVTD 532
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 68.1 bits (159), Expect = 1e-11
Identities = 38/128 (29%), Positives = 62/128 (48%)
Frame = +1
Query: 319 TPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEAD 498
T +E+++ + + K+PG+D +S ++K L L L IFN + +P W+ A
Sbjct: 438 TLLEIENSVAKAKG-KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAI 496
Query: 499 VIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHS 678
+I I KP KP + SYRPISLL F+ ++ Q F++NHS
Sbjct: 497 IIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHS 556
Query: 679 CVQQVHRL 702
+ + R+
Sbjct: 557 TMDALLRI 564
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 59.3 bits (137), Expect = 6e-09
Identities = 34/102 (33%), Positives = 48/102 (47%)
Frame = +1
Query: 409 LPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXX 588
LP+ ++ + +FNA FP WK++ +I I KP K K P SYRPISLL
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLF 63
Query: 589 XXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 714
+ + L QF F H ++QV+R+T I
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEI 105
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 56.0 bits (129), Expect = 5e-08
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +1
Query: 274 ERRASLPPSDALPPVTPM-EVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFN 450
E A ++ +PP + EV + L+ R++PG DGI+ + K + + LAS+F+
Sbjct: 419 ESEAPTAIAEEVPPALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFS 478
Query: 451 AAMANCIFPAVWKEADVIGIHK-PGKPKNHPTSYRPISLL 567
+ FPA WK V+ + K P K K P+SYR I LL
Sbjct: 479 RCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLL 518
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.8 bits (101), Expect = 1e-04
Identities = 34/121 (28%), Positives = 54/121 (44%)
Frame = +1
Query: 316 VTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEA 495
+T +E+ ++ L+ APG + IS ++IK + +FN N P +K +
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIKNSSHTTKNRITKLFNEIF-NSHIPQAYKTS 490
Query: 496 DVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNH 675
+I I KP K +SYRPISL V+ ++ D+QFGF+
Sbjct: 491 LIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGK 550
Query: 676 S 678
S
Sbjct: 551 S 551
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 128 PPS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPWTLFM*N**TVR*NAEPPCHPLMR 307
P + PQ R S+ TK+ C+P P +P P T+ + + +P C P
Sbjct: 478 PATYVPQTTRRPSITTKRPRCYPGSTDPECQPRTRP-TITTSQPRCSQGSTDPECQPATY 536
Query: 308 YHPSPR 325
P+ R
Sbjct: 537 LPPTTR 542
>U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p
protein.
Length = 1076
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 37 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 92
>BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich
repeat protein GP150 protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC,
isoform C protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB,
isoform B protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA,
isoform A protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 12 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD,
isoform D protein.
Length = 1076
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 187 LLADTLQTQCTPSTQSVDP----VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 342
LLA TL + +V P +H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 37 LLAFTLALIHASHSNTVGPKIHFIHDDLTENELNSGEEVSPTESLPKISTPKVKDL 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,252,453
Number of Sequences: 53049
Number of extensions: 768598
Number of successful extensions: 2399
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2383
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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