Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30904
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...   172   2e-43
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    56   1e-08
Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...    37   0.008
U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock prot...    31   0.55 
U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock prot...    31   0.55 
U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock prot...    31   0.55 
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr...    31   0.73 
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb...    31   0.73 
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   0.96 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   0.96 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      30   0.96 
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   1.7  
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    28   3.9  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    28   3.9  
AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell...    27   6.8  
Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical...    27   9.0  

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score =  172 bits (418), Expect = 2e-43
 Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
 Frame = +3

Query: 246 QMRYYSS--LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 419
           Q+R YSS  LP H +V LPALSPTME G++VSW+KKEGD+LSEGDLLCEIETDKATMGFE
Sbjct: 65  QVRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFE 124

Query: 420 TPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDD 551
           TPEEGYLAKILI  G+K VP+GKLLCIIV ++ DVAAFKDFKDD
Sbjct: 125 TPEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDD 168


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 36/125 (28%), Positives = 63/125 (50%)
 Frame = +3

Query: 117 LKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLP 296
           L +A R ++T   S + + +  T+ L    QN  + S+  + +     S +   I V  P
Sbjct: 13  LSRAARQSVTAASSAQPSLQAKTSLLEPLVQNVRITSSANFHMSAVRMSDV---ITVEGP 69

Query: 297 ALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 476
           A + ++  G I  W K++GD ++E +L+ EIETDK ++    P+ G + + L+  G K  
Sbjct: 70  AFAESISEGDI-RWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIVEFLVEDGAKVT 128

Query: 477 PVGKL 491
              KL
Sbjct: 129 AKQKL 133


>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 327 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKI 449
           +  W  KEGD +S+ D +CE+++DKA +      +G + K+
Sbjct: 47  VKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKL 87


>U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock protein
           protein 25,isoform c protein.
          Length = 108

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 23  SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 80

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 81  NPEQISSTLSTDGVLTVE 98


>U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock protein
           protein 25,isoform b protein.
          Length = 205

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 177

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 178 NPEQISSTLSTDGVLTVE 195


>U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock protein
           protein 25,isoform a protein.
          Length = 219

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 191

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 192 NPEQISSTLSTDGVLTVE 209


>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
            D2023.2 protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 321  GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 470
            G ++  + KEGDK+++   L  +   K  M  ++P  G +  I  P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
            carboxylase protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 321  GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 470
            G ++  + KEGDK+++   L  +   K  M  ++P  G +  I  P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDV 524
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSI 381


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDV 524
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSI 381


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDV 524
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSI 381


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 318 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPE-EGYLAKILIPAGTKGVPV--GK 488
           +G ++ W+K++GD L+ GD+    E+ K     E  +  G L +++     +G P+  G 
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVEVAKAPGRLQRVV----NEGDPIHPGS 749

Query: 489 LLCIIVGDQNDVAA 530
           +L  +V DQ +  A
Sbjct: 750 VLAKLV-DQTESEA 762


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 318 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 419
           +G ++ W+K++GD L+ GD+    E+ K     E
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVE 727


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 24/101 (23%), Positives = 44/101 (43%)
 Frame = +3

Query: 105 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 284
           L +G+   I  N+T  +S  L + KV+  + +  + +  + T   T     ++S P  I 
Sbjct: 74  LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126

Query: 285 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 407
                +    +S  + +W  +  ++L E D LC  E D  T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 24/101 (23%), Positives = 44/101 (43%)
 Frame = +3

Query: 105 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 284
           L +G+   I  N+T  +S  L + KV+  + +  + +  + T   T     ++S P  I 
Sbjct: 74  LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126

Query: 285 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 407
                +    +S  + +W  +  ++L E D LC  E D  T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165


>AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell
           lineage protein 17,isoform b protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 185 RNFPFCQFCTNAPRNVRPYSFLKT 114
           +NF FC  C++AP  V+P   + T
Sbjct: 503 KNFIFCGMCSSAPVKVKPNRAINT 526


>Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical
           protein F14F3.2 protein.
          Length = 670

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 346 RKGTNLVKAIFCARLKLTKQLWALRHLKKVTW 441
           +KGT +    FC    L   +  LRHL+K  W
Sbjct: 32  KKGTVICSECFCFHSYLGPSVSYLRHLRKSAW 63


>AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical
           protein Y63D3A.7 protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 455 SGRYKGSACREIIVHYCWRSE*CCGIQRF 541
           S R  G+A REI +H C +S    G++ F
Sbjct: 2   SVRLAGTALREIRIHVCQKSPASAGVRAF 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,244,836
Number of Sequences: 27780
Number of extensions: 281875
Number of successful extensions: 779
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)