Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30901
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 185 5e-48
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 179 4e-46
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 179 4e-46
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 166 2e-42
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 163 2e-41
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 159 3e-40
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 102 4e-23
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 91 2e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 90 3e-19
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 85 7e-18
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 81 1e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 81 2e-16
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 5e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 79 8e-16
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 8e-16
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 1e-15
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 71 2e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 1e-11
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 51 2e-07
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.023
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 31 0.12
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 4.7
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 26 6.1
SPAC29B12.04 |snz1||pyridoxine biosynthesis protein|Schizosaccha... 25 8.1
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 185 bits (451), Expect = 5e-48
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 11/180 (6%)
Frame = +2
Query: 104 RLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 283
R K+ +VGDG GKTCLL V+++ F E YVPTVF+NYV + VDG VE+ALWDTAGQE
Sbjct: 6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQE 65
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 463
DY+RLRPLSY ++ L+C++V S S +NV KW E+ HF +S+PI+LVA K DLR+
Sbjct: 66 DYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRND 125
Query: 464 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAA-LRKKP 610
K + VTT+EG+ + +KI A +ECSA + EVFE A RAA L+ KP
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKP 185
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 179 bits (435), Expect = 4e-46
Identities = 89/187 (47%), Positives = 120/187 (64%), Gaps = 10/187 (5%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 286
+K VVGDG VGKTCLL YT N+F +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 287 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 466
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H VP ++V T+IDLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 467 KA----------VVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKPVH 616
+T ++G++L +++ A VECSAL + + VF+EA+ AAL H
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPH 183
Query: 617 KRTCQYL 637
K+ + L
Sbjct: 184 KKKSKCL 190
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 179 bits (435), Expect = 4e-46
Identities = 87/180 (48%), Positives = 121/180 (67%), Gaps = 11/180 (6%)
Frame = +2
Query: 104 RLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 283
R K+ +VGDG GKTCLL V+++ F E YVPTVF+NYV + VDG +E+ALWDTAGQE
Sbjct: 6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQE 65
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 463
DY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF +++PI+LV K+DLR+
Sbjct: 66 DYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRND 125
Query: 464 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRK-KP 610
K + +T +EG+ + +KI A +ECSA ++EVFE A RA++ K KP
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKP 185
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 166 bits (404), Expect = 2e-42
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 6/173 (3%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 289
KI ++GDG GKT LL V+T+ F + Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 290 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 469
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+ V +VLVA K DLR +D+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 470 ------AVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKP 610
++ +EG KKI A +ECSA ++E F EA R AL +P
Sbjct: 135 EQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQP 187
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 163 bits (397), Expect = 2e-41
Identities = 86/189 (45%), Positives = 116/189 (61%), Gaps = 13/189 (6%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 283
K+ VVGDG GKTCLL V++ F E YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 463
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF PIVLV K DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 464 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKK-P 610
A VT Q+ + + + A + VECSA E ++EVF+ AV ++K
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNAPY-VECSAKENTGVNEVFQLAVGLTIKKSFS 194
Query: 611 VHKRTCQYL 637
K++C L
Sbjct: 195 FSKKSCVIL 203
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 159 bits (387), Expect = 3e-40
Identities = 83/175 (47%), Positives = 110/175 (62%), Gaps = 10/175 (5%)
Frame = +2
Query: 104 RLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 283
R K+ VVGDG GKT LL V+T F EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 463
+YERLRP+SY + + LV +++ S S ENV KW E+ +VP +LV K DLRS
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD 127
Query: 464 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 598
A+ V +Q+ + + ++I A +ECS+L +D+VFE A RAAL
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 102 bits (245), Expect = 4e-23
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 289
K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQE+Y
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEY 69
Query: 290 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKIDLRSS 463
+R FL+ Y++ SRSS++ + +Y ++ + P+VLVA K DL +
Sbjct: 70 SAMREQYMRTGEGFLLVYNITSRSSFDE-ISTFYQQILRVKDKDTFPVVLVANKCDLEA- 127
Query: 464 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALR 601
+ VV+ EG++L K + + VE SA R+N++E F VR R
Sbjct: 128 -ERVVSRAEGEQLAKSMHCLY-VETSAKLRLNVEEAFYSLVRTIRR 171
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 90.6 bits (215), Expect = 2e-19
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Frame = +2
Query: 95 RRSRLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGH-ITVDGEDVEMALWDT 271
+R LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V + LWDT
Sbjct: 5 KRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDT 64
Query: 272 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA----SVPIVLVA 439
AGQE ++ L Y +C ++ Y+V + S+++ V W E + ++ + P ++V
Sbjct: 65 AGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQEFLYQTSQDECAFPFIIVG 123
Query: 440 TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV--ECSALERINMDEVFEEAVRAALRKK 607
+ID +S +AV + K K ++++ E SA E N+ ++FE R AL +
Sbjct: 124 NQIDKDASKRAVSLHRALDYCKSK-HGSNMIHFEASAKENTNVTDLFETVSRLALENE 180
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 89.8 bits (213), Expect = 3e-19
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 283
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 460
+ + Y L+ Y V + S++N V W+ + +H S +V +L+ K D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVEQHASENVYKILIGNKCD--C 126
Query: 461 SDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKK 607
D+ V+ ++G+ L ++ +E SA +N+DE F R ++K
Sbjct: 127 EDQRQVSFEQGQALADEL-GVKFLEASAKTNVNVDEAFFTLAREIKKQK 174
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 85.4 bits (202), Expect = 7e-18
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 286
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 287 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 463
Y + Y L+ Y + +SS++N V +W EL+ H +++ I+LV K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELREHADSNIVIMLVGNKTDL--L 128
Query: 464 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALR 601
V+T+E + + + +E SA++ N++E F+ + R
Sbjct: 129 HLRAVSTEEAQAFAAENNLS-FIETSAMDASNVEEAFQTVLTEIFR 173
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 81.4 bits (192), Expect = 1e-16
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 289
+I V+G VGK+ L Y N F E Y PT+ + + +I G++ + DTAGQ++Y
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 290 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKIDLRSSD 466
L + +++ YS+ S+SS+E V L H VPIV+V K DL
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHM-- 125
Query: 467 KAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 577
+ VT +EGK L + + A E SA N+ FE
Sbjct: 126 QRAVTAEEGKALANEWKCA-WTEASARHNENVARAFE 161
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 81.0 bits (191), Expect = 2e-16
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Frame = +2
Query: 89 G*RRSRLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVG-HITVDGEDVEMALW 265
G ++ LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LW
Sbjct: 3 GKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLW 62
Query: 266 DTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE-LKHFSAS----VPIV 430
DTAGQE ++ L Y +C ++ Y V + S+E + W E L S S P +
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDEFLIQASPSNPETFPFI 121
Query: 431 LVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 598
L+ K+D+ K +V+ + + E SA E IN+ E FE + AL
Sbjct: 122 LLGNKVDV-EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLAL 176
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 79.4 bits (187), Expect = 5e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 286
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 287 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 466
LR Y Q C ++ + V SR +Y+NV H W+ +L ++PIVL K+D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKERK 129
Query: 467 -KAVVTTQEGKK 499
KA T KK
Sbjct: 130 VKAKAITFHRKK 141
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 78.6 bits (185), Expect = 8e-16
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 283
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKID---- 451
++ + P+ L + + SR S N + +WY + + F+ + +L+ TK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMT 129
Query: 452 LRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 577
D+ +T Q ++ K ++A+ LV CS IN+ ++F+
Sbjct: 130 FPREDQEEITKQ-ARRYAKAMKAS-LVFCSTSHSINVQKIFK 169
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 78.6 bits (185), Expect = 8e-16
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 286
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 287 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 463
+ + Y + ++ Y V + S+ N V +W E+ ++ V +LV K D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRYAVEGVNRLLVGNKSDM--V 126
Query: 464 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 574
DK VV K+ + L E SA + N+++ F
Sbjct: 127 DKKVVEYSVAKEFADSLNIPFL-ETSAKDSTNVEQAF 162
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 77.8 bits (183), Expect = 1e-15
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Frame = +2
Query: 104 RLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQ 280
+ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAGQ
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 281 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLR 457
E + L P ++ ++ Y + + +S+ N KW +++ V IVLV K DL
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL- 128
Query: 458 SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKPVHKRTCQYL 637
+DK VT +EG+K K+++ H+ E SA N+ +F + + + V ++ Q +
Sbjct: 129 -ADKRQVTQEEGEKKAKELKIMHM-ETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQMI 186
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 70.5 bits (165), Expect = 2e-13
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Frame = +2
Query: 110 KITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGH-ITVD-GEDVEMALWDTAGQE 283
K+ ++GD VGK+ L+ + +++F + T+ ++ + +D V++ +WDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 460
Y+ L P+ Y NC +V Y + +S E W EL + + I L K+DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 461 SDKAV 475
+AV
Sbjct: 135 ERRAV 139
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.5 bits (150), Expect = 1e-11
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 271
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 272 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKI 448
AGQE + + Y ++ Y V ++ S+E + W +++ + S + +VL +K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIRAMAPSTICVVLAGSKS 128
Query: 449 DLRSSDKAVVTTQEGKKL--KKKIRAAHLVECSALERINMDEVFEEAVRAALRK 604
DL++ + V+T+E + +K I +AH E S+ N++E F V + +
Sbjct: 129 DLQNQRQ--VSTEEAAEFCSEKHISSAH--ETSSYTGSNVEECFLSVVSTIITR 178
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 50.8 bits (116), Expect = 2e-07
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDG-EDVEMALWDTAGQE 283
+++ + GD VGK+ L+ + + +P VF D +DV + L DT Q
Sbjct: 4 VRVVICGDQGVGKSSLISALIQEDNVTS-IPKVFPIISIPSNPDSNDDVSLVLVDT--QS 60
Query: 284 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI-DLRS 460
D L+ ++C SYE V W P + +VPIVL K DL +
Sbjct: 61 DSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDN 120
Query: 461 SDKAVVTTQEGKKLKKKIRAAH-LVECSALERINMDEVF 574
E L + + + CSALE+IN++E+F
Sbjct: 121 YQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELF 159
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.023
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 98 RSRLKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAG 277
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD G
Sbjct: 15 KREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGG 70
Query: 278 QEDYERLRPL 307
Q +++RPL
Sbjct: 71 Q---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 107 LKITVVGDGMVGKTCLLYVYTRNEFXEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 286
++I ++G GKT +LY N+ +PTV N TV ++++ +WD GQ
Sbjct: 22 MRILMLGLDAAGKTTILYKLKLNQSVVT-IPTVGFNVE---TVTYKNIKFNVWDVGGQ-- 75
Query: 287 YERLRPL 307
+++RPL
Sbjct: 76 -DKIRPL 81
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 641 IKDIGRCVCGLVSCGGPRAPLPRILRPCLSALVLN 537
I + RC+ C P+ PLP LR L LN
Sbjct: 386 IPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLN 420
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 324 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSXNSFLVYTYS 154
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAC29B12.04 |snz1||pyridoxine biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 509 KIRAAHLVECSALERINMDEVFEEAV 586
K+R H VE LE I +D + E V
Sbjct: 83 KVRIGHFVEAQILESIGVDYIDESEV 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,002,975
Number of Sequences: 5004
Number of extensions: 63013
Number of successful extensions: 217
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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