Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30898
(836 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 261 1e-68
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 254 2e-66
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 249 8e-65
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 244 2e-63
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 241 1e-62
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 239 5e-62
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 233 4e-60
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 227 3e-58
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 225 1e-57
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 221 1e-56
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 219 7e-56
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 208 2e-52
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 202 7e-51
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 200 3e-50
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 199 6e-50
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 197 3e-49
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 193 4e-48
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 192 9e-48
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 191 2e-47
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 180 3e-44
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 177 3e-43
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 176 5e-43
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 176 5e-43
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 175 9e-43
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 174 2e-42
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 173 5e-42
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 166 5e-40
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 159 6e-38
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 159 1e-37
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 154 2e-36
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 154 3e-36
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 153 4e-36
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 151 2e-35
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 146 5e-34
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 132 1e-29
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 129 7e-29
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 127 3e-28
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 124 3e-27
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 120 5e-26
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 116 6e-25
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 113 5e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 113 7e-24
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 112 1e-23
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 111 2e-23
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 110 5e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 109 1e-22
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 109 1e-22
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 106 6e-22
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 105 1e-21
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 105 1e-21
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 103 7e-21
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 102 1e-20
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 102 1e-20
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 99 1e-19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 99 2e-19
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 97 5e-19
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 97 6e-19
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 95 2e-18
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 95 3e-18
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 94 4e-18
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 93 1e-17
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 90 6e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 89 2e-16
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 87 4e-16
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 86 1e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 85 2e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 85 2e-15
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 85 2e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 85 2e-15
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 85 3e-15
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 85 3e-15
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 84 5e-15
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 83 8e-15
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 6e-14
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 80 6e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 79 1e-13
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 79 2e-13
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 77 4e-13
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 77 6e-13
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 77 6e-13
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 77 7e-13
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 77 7e-13
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 77 7e-13
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 76 1e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 74 4e-12
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 73 9e-12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 72 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 4e-11
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 68 3e-10
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 67 6e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 61 3e-08
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 61 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 44 0.004
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.005
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 41 0.044
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.55
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 36 0.95
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.7
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.8
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 6.7
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 8.9
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 261 bits (640), Expect = 1e-68
Identities = 139/233 (59%), Positives = 147/233 (63%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 8 NHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMV 67
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYP
Sbjct: 68 MPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYP 127
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVGI
Sbjct: 128 PLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGI 187
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 777
TAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 188 TAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 254 bits (622), Expect = 2e-66
Identities = 132/208 (63%), Positives = 140/208 (67%)
Frame = +1
Query: 166 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 345
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 346 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 525
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 526 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 705
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 706 FDPAGGGDPILYQHLF*FFGHPEVYILI 789
FDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 193 FDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 249 bits (609), Expect = 8e-65
Identities = 137/255 (53%), Positives = 152/255 (59%), Gaps = 3/255 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 12 NHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMV 71
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYP 131
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +V I
Sbjct: 132 PLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLI 191
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPG
Sbjct: 192 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 251
Query: 799 FG---YNFSYYFTRK 834
FG + +YY +K
Sbjct: 252 FGMISHVVTYYAGKK 266
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 244 bits (597), Expect = 2e-63
Identities = 133/255 (52%), Positives = 149/255 (58%), Gaps = 3/255 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 71 MPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYP 130
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV AV +
Sbjct: 131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLV 190
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
Query: 799 FG---YNFSYYFTRK 834
FG + +YY +K
Sbjct: 251 FGIISHVVAYYAGKK 265
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 241 bits (591), Expect = 1e-62
Identities = 131/255 (51%), Positives = 149/255 (58%), Gaps = 3/255 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 71 MPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYP 130
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +V +
Sbjct: 131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLV 190
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
Query: 799 FG---YNFSYYFTRK 834
FG + +YY +K
Sbjct: 251 FGMISHVVTYYAGKK 265
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 239 bits (586), Expect = 5e-62
Identities = 130/255 (50%), Positives = 149/255 (58%), Gaps = 3/255 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 11 NHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMV 70
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYP
Sbjct: 71 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYP 130
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +V I
Sbjct: 131 PLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLI 190
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
Query: 799 FG---YNFSYYFTRK 834
FG + +YY +K
Sbjct: 251 FGMISHIVTYYSGKK 265
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 233 bits (570), Expect = 4e-60
Identities = 127/219 (57%), Positives = 147/219 (67%)
Frame = -1
Query: 752 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 573
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 572 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 393
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 392 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 213
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 212 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 96
L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 227 bits (555), Expect = 3e-58
Identities = 120/244 (49%), Positives = 141/244 (57%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 252
NHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 12 NHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFF 71
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N VP+++GAPD+AFPR+NNI F +VE G+GTG TV
Sbjct: 72 MVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTV 131
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV +V
Sbjct: 132 YPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 192 LVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 251
Query: 793 PGFG 804
PGFG
Sbjct: 252 PGFG 255
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 225 bits (550), Expect = 1e-57
Identities = 123/244 (50%), Positives = 139/244 (56%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILII 248
Query: 793 PGFG 804
PGFG
Sbjct: 249 PGFG 252
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 221 bits (541), Expect = 1e-56
Identities = 118/244 (48%), Positives = 141/244 (57%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
NHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 17 NHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFF 76
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N LVP+++G+PD+AFPR+NNI F +VE G GTG TV
Sbjct: 77 MVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTV 136
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLSS +H G +VDLAIFSLH++G SS S ++PLFV ++
Sbjct: 137 YPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSI 196
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILIL
Sbjct: 197 LVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILIL 256
Query: 793 PGFG 804
PGFG
Sbjct: 257 PGFG 260
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 219 bits (535), Expect = 7e-56
Identities = 113/213 (53%), Positives = 132/213 (61%)
Frame = +1
Query: 166 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 345
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 346 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 525
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 526 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 705
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 706 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
FDP+GGGDPILYQHLF FFGHPEVYILILPGFG
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFG 236
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 208 bits (507), Expect = 2e-52
Identities = 111/229 (48%), Positives = 130/229 (56%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYP
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYP 131
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +V I
Sbjct: 132 PLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLI 191
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 765
TA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 192 TAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 202 bits (494), Expect = 7e-51
Identities = 113/243 (46%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 255
N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 11 NAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFM 70
Query: 256 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 435
N L+PL LG PD+ FPR+NNI + +ENG GTG T+Y
Sbjct: 71 VMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLY 130
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PPLS +H G SVDLAIF LHL+GISS +L LF AV
Sbjct: 131 PPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVV 190
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+P
Sbjct: 191 ITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIP 250
Query: 796 GFG 804
GFG
Sbjct: 251 GFG 253
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 200 bits (488), Expect = 3e-50
Identities = 112/244 (45%), Positives = 132/244 (54%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N L+PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILII 249
Query: 793 PGFG 804
PGFG
Sbjct: 250 PGFG 253
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 199 bits (486), Expect = 6e-50
Identities = 105/196 (53%), Positives = 118/196 (60%)
Frame = +1
Query: 166 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 345
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 346 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 525
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 526 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 705
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 706 FDPAGGGDPILYQHLF 753
FDPAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 197 bits (480), Expect = 3e-49
Identities = 110/244 (45%), Positives = 131/244 (53%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N ++PL++GA D++FPRIN+I F +VE+GAGTG TV
Sbjct: 70 LAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLSS AH G SVDLAIFSLHL ISS S ++PLFV A+
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILII 249
Query: 793 PGFG 804
PGFG
Sbjct: 250 PGFG 253
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 193 bits (471), Expect = 4e-48
Identities = 106/243 (43%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 255
N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 37 NAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFM 96
Query: 256 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 435
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+Y
Sbjct: 97 VMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLY 156
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PPLS +H VDL IF LHL+GISS +L LF AV
Sbjct: 157 PPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVV 216
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+P
Sbjct: 217 ITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIP 276
Query: 796 GFG 804
GFG
Sbjct: 277 GFG 279
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 192 bits (468), Expect = 9e-48
Identities = 107/244 (43%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
NHK IG LY EL PG L G+ YN I T H
Sbjct: 13 NHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFV 72
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N VP+++GAPD++FPR+NN F E G GTG TV
Sbjct: 73 VVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTV 132
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLSS +H G SVDL IFS HL GI S LPLFV +V
Sbjct: 133 YPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILIL
Sbjct: 193 AVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILIL 252
Query: 793 PGFG 804
PGFG
Sbjct: 253 PGFG 256
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 191 bits (466), Expect = 2e-47
Identities = 108/227 (47%), Positives = 123/227 (54%), Gaps = 2/227 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 753
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 180 bits (439), Expect = 3e-44
Identities = 106/247 (42%), Positives = 129/247 (52%), Gaps = 5/247 (2%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 255
N KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 39 NAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFM 98
Query: 256 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV- 432
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 99 VMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLL 158
Query: 433 ---YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 603
YPPLS +H G SVDLAIF+LHL+G+SS +L LF
Sbjct: 159 KDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFG 218
Query: 604 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 783
A + IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYI
Sbjct: 219 WATWSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYI 271
Query: 784 LILPGFG 804
LI+PGFG
Sbjct: 272 LIIPGFG 278
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 177 bits (431), Expect = 3e-43
Identities = 100/211 (47%), Positives = 113/211 (53%)
Frame = +1
Query: 82 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 261
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 262 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 441
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 442 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 621
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 622 AFXXXXXXXXXAGAITILLTDRNLNTSFFDP 714
A A IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 176 bits (429), Expect = 5e-43
Identities = 90/210 (42%), Positives = 121/210 (57%)
Frame = +1
Query: 175 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 354
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 355 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 534
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 535 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 714
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 715 AGGGDPILYQHLF*FFGHPEVYILILPGFG 804
+GGGDP+LY+H+F FFGHPEVYILI+P FG
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFG 270
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 176 bits (429), Expect = 5e-43
Identities = 90/210 (42%), Positives = 121/210 (57%)
Frame = +1
Query: 175 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 354
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 355 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 534
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 535 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 714
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 715 AGGGDPILYQHLF*FFGHPEVYILILPGFG 804
+GGGDP+LY+H+F FFGHPEVYILI+P FG
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFG 270
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 175 bits (427), Expect = 9e-43
Identities = 110/262 (41%), Positives = 132/262 (50%), Gaps = 20/262 (7%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY--- 210
NHKDIGTLY AEL PG + D DQ Y
Sbjct: 35 NHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLW 94
Query: 211 NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXX 390
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 95 NVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLG 154
Query: 391 XXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 558
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 155 STFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILN 213
Query: 559 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 738
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP L
Sbjct: 214 MRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPEL 273
Query: 739 YQHLF*FFGHPEVYILILPGFG 804
YQHLF FFGHPEVYI+ILPGFG
Sbjct: 274 YQHLFWFFGHPEVYIMILPGFG 295
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 174 bits (424), Expect = 2e-42
Identities = 102/240 (42%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N L+PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 173 bits (421), Expect = 5e-42
Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 2/216 (0%)
Frame = +1
Query: 163 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 336
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 337 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 516
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 517 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 696
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 697 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFG 358
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 166 bits (404), Expect = 5e-40
Identities = 96/231 (41%), Positives = 118/231 (51%), Gaps = 2/231 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL PG L G++Q++N +V HA
Sbjct: 10 NAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFF 69
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N ++PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 MVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV A+
Sbjct: 130 YPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 765
ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 190 LITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 159 bits (387), Expect = 6e-38
Identities = 95/240 (39%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTV 134
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
Y PL+ +H G +VDLAIFSLHL+G SS ++ +PLF AV
Sbjct: 135 YFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 195 LFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 159 bits (385), Expect = 1e-37
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +1
Query: 301 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 480
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 481 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 660
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 661 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 768
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 154 bits (374), Expect = 2e-36
Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Frame = +1
Query: 175 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 354
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 355 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 534
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 535 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 714
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 715 AGGGDPILYQHLF*FFGH--PEVYILIL 792
+GGGDP+LY+H+F FFG P + I+I+
Sbjct: 241 SGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 154 bits (373), Expect = 3e-36
Identities = 86/243 (35%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +PL++ D++ PR+NN+ + G G G T+YP
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYP 132
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVG 615
PLS++ G +DLA+FSLH+AG+SS F L P+ + +
Sbjct: 133 PLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLF 192
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP
Sbjct: 193 GTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILP 252
Query: 796 GFG 804
FG
Sbjct: 253 AFG 255
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 153 bits (372), Expect = 4e-36
Identities = 86/244 (35%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N ++PL+LGAP++AFPR+N + F + G G+ T
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTF 139
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 140 YPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTS 198
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++IL
Sbjct: 199 YLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIIL 258
Query: 793 PGFG 804
P FG
Sbjct: 259 PVFG 262
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 151 bits (366), Expect = 2e-35
Identities = 79/208 (37%), Positives = 103/208 (49%)
Frame = +1
Query: 181 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 360
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 361 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 540
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 541 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 720
SF LF+ A ITA AG +T++L DRN NTSF+D G
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG 227
Query: 721 GGDPILYQHLF*FFGHPEVYILILPGFG 804
GGD IL+QH+F FFGHPEVYI++LP FG
Sbjct: 228 GGDLILFQHIFWFFGHPEVYIILLPVFG 255
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 146 bits (355), Expect = 5e-34
Identities = 76/193 (39%), Positives = 106/193 (54%)
Frame = +1
Query: 175 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 354
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 355 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 534
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 535 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 714
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 715 AGGGDPILYQHLF 753
+GGGDP+LY+H+F
Sbjct: 241 SGGGDPLLYEHIF 253
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 132 bits (318), Expect = 1e-29
Identities = 81/250 (32%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Frame = +1
Query: 64 NSARGNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHA 234
NS GNHK IG Y EL G +I D +IYN + T H
Sbjct: 11 NSVSGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHG 70
Query: 235 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 414
N L P++LG D+ +PR+N +E G+
Sbjct: 71 LIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGS 130
Query: 415 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 594
GTG T+YPPLS+++++ G +D IF L AGI+S D++
Sbjct: 131 GTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRIS 188
Query: 595 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 774
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPE
Sbjct: 189 PAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPE 248
Query: 775 VYILILPGFG 804
VYI+ILPGFG
Sbjct: 249 VYIMILPGFG 258
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 129 bits (312), Expect = 7e-29
Identities = 80/196 (40%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 613 GITAFXXXXXXXXXAG 660
+TA AG
Sbjct: 189 FVTAILLLLSLPVLAG 204
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 127 bits (307), Expect = 3e-28
Identities = 79/246 (32%), Positives = 111/246 (45%), Gaps = 4/246 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 249
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 250 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 429
N +P++ G+P++A+PRIN+I E G GTG T
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWT 132
Query: 430 VYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 606
+YPPLS+++ +VD+ IF L ++G++S + L +
Sbjct: 133 LYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTW 192
Query: 607 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 786
++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYIL
Sbjct: 193 SLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYIL 252
Query: 787 ILPGFG 804
ILP FG
Sbjct: 253 ILPAFG 258
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 124 bits (299), Expect = 3e-27
Identities = 83/242 (34%), Positives = 105/242 (43%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG LY L +P + +YN +VT H
Sbjct: 109 DHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFL 168
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +P+ L D+ PR+N++ G G G T+YP
Sbjct: 169 MPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYP 226
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLS G VD +FSLHLAG+SS S + V A
Sbjct: 227 PLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLF 280
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPG
Sbjct: 281 TSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPG 340
Query: 799 FG 804
FG
Sbjct: 341 FG 342
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 120 bits (289), Expect = 5e-26
Identities = 80/242 (33%), Positives = 107/242 (44%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NH D+ LY +L P L D +YN VT H
Sbjct: 8 NHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAA 65
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N L+P PD+ FPR+N + F ++ + A G T YP
Sbjct: 66 MPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYP 120
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLSS SV+ ++FSLHLAGI+S + L LF ++ +
Sbjct: 121 PLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVL 174
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
+ A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP
Sbjct: 175 VSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPV 234
Query: 799 FG 804
FG
Sbjct: 235 FG 236
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 116 bits (280), Expect = 6e-25
Identities = 89/259 (34%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFA 152
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*T 429
N L+PL++GA D+AFPRIN I F I E A TG T
Sbjct: 153 TPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWT 211
Query: 430 VYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 594
+Y PLS N A+ G VDL + LHL+G+S+ S+ L
Sbjct: 212 MYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLD 269
Query: 595 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 774
+F + + AI +LL DRN TSFF AG G IL+QHLF FFGHPE
Sbjct: 270 IFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPE 327
Query: 775 VYILILPGFGYNFSYYFTR 831
VYI++LP G SY R
Sbjct: 328 VYIIVLPPMGI-ISYILPR 345
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 113 bits (272), Expect = 5e-24
Identities = 74/248 (29%), Positives = 111/248 (44%), Gaps = 6/248 (2%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXXX 246
+HK IG LY EL G I + IYN +T H
Sbjct: 17 SHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIML 76
Query: 247 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG 423
N L+P+++G +++ PR+N I F ++ +G
Sbjct: 77 FVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSG 136
Query: 424 *TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 600
T+YPPLS+ A G ++DL++ +H+ GISS +F + ++
Sbjct: 137 WTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIY 196
Query: 601 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 780
++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY
Sbjct: 197 NFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVY 254
Query: 781 ILILPGFG 804
++ILP FG
Sbjct: 255 VIILPVFG 262
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 113 bits (271), Expect = 7e-24
Identities = 73/242 (30%), Positives = 100/242 (41%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N VPL++GA D+AFPR+N+ F + + G Y
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYV 149
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLSS + VD I L + GI S S ++PLFV + +
Sbjct: 150 PLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLM 209
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPG
Sbjct: 210 QAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPG 269
Query: 799 FG 804
FG
Sbjct: 270 FG 271
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 112 bits (269), Expect = 1e-23
Identities = 67/210 (31%), Positives = 97/210 (46%)
Frame = +1
Query: 178 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 357
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 358 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 537
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 538 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 717
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 718 GGGDPILYQHLF*FFGHPEVYILILPGFGY 807
GGDP++YQ++F F+ HP VY+ +LP FG+
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFGF 209
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 111 bits (268), Expect = 2e-23
Identities = 71/217 (32%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Frame = +1
Query: 208 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 387
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 388 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 564
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 565 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 729
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 730 PILYQHLF*FFGHPEVYILILPGFGY--NFSYYFTRK 834
PIL+QHLF FGHPEVYI+ILP +G + +F RK
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLSFFARK 302
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 110 bits (264), Expect = 5e-23
Identities = 74/243 (30%), Positives = 102/243 (41%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N ++PL+LGA D+AFPR+N + ++ G TG T Y
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYT 159
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
P S AH +V +F + G SS ++ ++PLFV A+
Sbjct: 160 PYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYA 216
Query: 619 TAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
T+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP
Sbjct: 217 TS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLP 275
Query: 796 GFG 804
FG
Sbjct: 276 SFG 278
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 109 bits (261), Expect = 1e-22
Identities = 76/242 (31%), Positives = 98/242 (40%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG Y EL P ++YN ++T H
Sbjct: 26 DHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWI 85
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N L+PL++G D+AFPR+N + F V G T YP
Sbjct: 86 VPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYP 143
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLS G +L I SL L G SS +PLF A+
Sbjct: 144 PLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLA 201
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP
Sbjct: 202 TSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPF 261
Query: 799 FG 804
FG
Sbjct: 262 FG 263
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 109 bits (261), Expect = 1e-22
Identities = 73/244 (29%), Positives = 103/244 (42%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HKDIG LY EL + +YN ++T+H
Sbjct: 67 DHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFG 126
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TV 432
N +PL++ A D+AFPRIN I F ++ A T T+
Sbjct: 127 TPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTM 185
Query: 433 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
Y PLS ++ +VD+ + LHL G+S+ + L +F +
Sbjct: 186 YTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTM 243
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+L
Sbjct: 244 LTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVL 302
Query: 793 PGFG 804
P G
Sbjct: 303 PPMG 306
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 106 bits (255), Expect = 6e-22
Identities = 77/254 (30%), Positives = 105/254 (41%), Gaps = 2/254 (0%)
Frame = +1
Query: 49 PPGCRNS-ARGNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIV 222
PPG + + +HK IG Y +L P + IG D+ YN I
Sbjct: 17 PPGLWGALSTVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIF 75
Query: 223 TAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV 402
T H LVPL++G IAFPR+N + V
Sbjct: 76 TMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAV 134
Query: 403 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 582
+ G G Y PLS G+ D+ + +S+ S
Sbjct: 135 DTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSL 194
Query: 583 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 762
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FF
Sbjct: 195 DRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFF 254
Query: 763 GHPEVYILILPGFG 804
GHPEVYI+ LP G
Sbjct: 255 GHPEVYIIFLPAVG 268
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 105 bits (253), Expect = 1e-21
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
Frame = +1
Query: 166 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 345
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 346 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 516
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 517 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 696
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 697 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGYNFSYYF 825
TSFF P GGGDP+L+QH F F+ HP VY+L+LP FG FS F
Sbjct: 243 TSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI-FSELF 284
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 105 bits (253), Expect = 1e-21
Identities = 72/242 (29%), Positives = 96/242 (39%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG +Y +LG P + +YN + T H
Sbjct: 30 DHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGL 89
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +VPL++GA D+AFPR+N + V G Y
Sbjct: 90 MPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYA 148
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ VD I + L G++S + +++PLFV +
Sbjct: 149 PLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLV 208
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
AF A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP
Sbjct: 209 VAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPT 268
Query: 799 FG 804
G
Sbjct: 269 MG 270
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 103 bits (246), Expect = 7e-21
Identities = 67/239 (28%), Positives = 98/239 (41%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N L+P+++GA D+AFP++N + F +V+ GA TG T Y
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYT 152
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
P S+ + V L F L G SS + +LPLFV ++
Sbjct: 153 PYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYA 209
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
T+ ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP
Sbjct: 210 TSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLP 268
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 102 bits (245), Expect = 1e-20
Identities = 70/243 (28%), Positives = 98/243 (40%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK +G +Y AEL PG ++ +N + T H
Sbjct: 37 DHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYG 96
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVY 435
N ++PL +GAPD+AFPR+N F + GA G T+Y
Sbjct: 97 TPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMY 155
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PLS I G D+ I + GI S + ++P+F +
Sbjct: 156 SPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIF 215
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
+ + A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP
Sbjct: 216 VVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALP 274
Query: 796 GFG 804
FG
Sbjct: 275 FFG 277
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 102 bits (245), Expect = 1e-20
Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HKDIG LY +L P S Y VT H
Sbjct: 20 DHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFA 79
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVY 435
N +VPL +GA D+AFPR+N + + E+GA G T+Y
Sbjct: 80 SPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLY 138
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PL++ I G +DLA ++ L +S + ++P+F ++
Sbjct: 139 APLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSIL 198
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILIL 792
T +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+
Sbjct: 199 FTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLF 256
Query: 793 PGFG 804
P G
Sbjct: 257 PALG 260
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 99.1 bits (236), Expect = 1e-19
Identities = 57/123 (46%), Positives = 65/123 (52%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 12 NHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMX 71
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYP 131
Query: 439 PLS 447
PL+
Sbjct: 132 PLA 134
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 98.7 bits (235), Expect = 2e-19
Identities = 66/242 (27%), Positives = 94/242 (38%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK +G +Y A+L P + D YN I T H
Sbjct: 52 DHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMA 111
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +VPL +GA D+AFP +NN+ F ++ G T Y
Sbjct: 112 MPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYM 170
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+SN G + + L +AGI + + ++P+F I
Sbjct: 171 PLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLI 230
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
T A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP
Sbjct: 231 TMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPA 290
Query: 799 FG 804
FG
Sbjct: 291 FG 292
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 97.1 bits (231), Expect = 5e-19
Identities = 61/242 (25%), Positives = 97/242 (40%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK I LY +L P + Q YN ++T H
Sbjct: 23 DHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAA 82
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +VPL +GA D++FP +N + F + G T Y
Sbjct: 83 MPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYA 141
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
LS + +G +D + L ++G+ + ++ +LPLF +
Sbjct: 142 SLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFV 199
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
+ + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP
Sbjct: 200 ASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPA 259
Query: 799 FG 804
FG
Sbjct: 260 FG 261
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 96.7 bits (230), Expect = 6e-19
Identities = 61/179 (34%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 462
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 463 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 642
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 643 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMG 262
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 95.1 bits (226), Expect = 2e-18
Identities = 64/243 (26%), Positives = 96/243 (39%), Gaps = 1/243 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG +Y +L P + + YN I+T H
Sbjct: 23 DHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFI 82
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVY 435
N +VPL+LGA D+A PR+N + GA G T Y
Sbjct: 83 IQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFY 142
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
P S A VD + ++ L G SS S ++P++V +V
Sbjct: 143 YPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVF 199
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
+ A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP
Sbjct: 200 AASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLP 259
Query: 796 GFG 804
G
Sbjct: 260 YLG 262
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 94.7 bits (225), Expect = 3e-18
Identities = 75/255 (29%), Positives = 104/255 (40%), Gaps = 3/255 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXX 255
+H D+G LY AEL PG+ I D +N + T H
Sbjct: 19 HHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLF 78
Query: 256 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 435
N VP+++ D+A+P++N I F + T
Sbjct: 79 ILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT----- 132
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 616 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 795
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 796 GFG--YNFSYYFTRK 834
G Y F+RK
Sbjct: 252 AIGMMYEMVPRFSRK 266
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 93.9 bits (223), Expect = 4e-18
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Frame = +1
Query: 202 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 381
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 382 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 549
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 550 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 714
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 715 ------AGGGDPILYQHLF*FFGHPEVYILILPGFG 804
AGGG P+L+QHLF F+ HP VYI+ILP G
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMG 301
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 92.7 bits (220), Expect = 1e-17
Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 2/241 (0%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXX 255
+HK +G LY EL G I DD +YNT + H
Sbjct: 13 DHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAF 72
Query: 256 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 435
N +PL++GA D+AFPR+N + + + T Y
Sbjct: 73 QIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGY 132
Query: 436 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PP S I H + FS+ L G +S +++L +FV A
Sbjct: 133 PPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT- 188
Query: 616 ITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 792
+ AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ L
Sbjct: 189 LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFL 248
Query: 793 P 795
P
Sbjct: 249 P 249
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 90.2 bits (214), Expect = 6e-17
Identities = 62/242 (25%), Positives = 91/242 (37%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NH D+G ++ A+L P S + YN + T H
Sbjct: 28 NHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFA 87
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
L+P +LG+ D+AFPR+ F + +G +YP
Sbjct: 88 IPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYP 146
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PLSS + G + D + + IS+ S ++P+F +
Sbjct: 147 PLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALV 206
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA +L +R + FF A GGD +L+QHLF FGHPEVYI+ LP
Sbjct: 207 TAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPA 266
Query: 799 FG 804
G
Sbjct: 267 AG 268
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 88.6 bits (210), Expect = 2e-16
Identities = 63/252 (25%), Positives = 96/252 (38%)
Frame = +1
Query: 49 PPGCRNSARGNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTA 228
P G R + +H+ +G + +L P + + YN + T
Sbjct: 44 PSGIRVLSAVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTM 103
Query: 229 HAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN 408
H L+PL++GA D+ FPR+ + + +
Sbjct: 104 HGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDA 162
Query: 409 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 588
G +Y PLS++ G S D + + LA I+S S +
Sbjct: 163 APDGGWFMYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTK 222
Query: 589 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 768
+P+ + + TAF +L +R L FFD GGDP+L+QHLF FGH
Sbjct: 223 MPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGH 282
Query: 769 PEVYILILPGFG 804
PEVYI+ LP G
Sbjct: 283 PEVYIIFLPAAG 294
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +1
Query: 166 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 345
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 346 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 519
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 87.4 bits (207), Expect = 4e-16
Identities = 84/227 (37%), Positives = 97/227 (42%), Gaps = 1/227 (0%)
Frame = +1
Query: 82 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 759
A AIT+L R N SFF P G P + F F
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 85.8 bits (203), Expect = 1e-15
Identities = 70/228 (30%), Positives = 94/228 (41%), Gaps = 15/228 (6%)
Frame = +1
Query: 166 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 342
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 343 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 513
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 514 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 690
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 691 LNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFG 804
L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FG
Sbjct: 245 LGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFG 292
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 85.4 bits (202), Expect = 2e-15
Identities = 54/173 (31%), Positives = 77/173 (44%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 465
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 646 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FG
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFG 297
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 85.4 bits (202), Expect = 2e-15
Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 4/246 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG +Y +L PG + + +N + T HA
Sbjct: 28 DHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGV 87
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG* 426
N +PL++GA D+AFPR+N + ++ G G
Sbjct: 88 MPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGW 146
Query: 427 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 606
Y L+S G D L L GI + + ++P+FV
Sbjct: 147 FGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVW 206
Query: 607 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 786
+T+ A+ +L+ DR +FF+ GG + YQHLF FGHPEVYIL
Sbjct: 207 TTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYIL 266
Query: 787 ILPGFG 804
ILP G
Sbjct: 267 ILPAMG 272
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 85.4 bits (202), Expect = 2e-15
Identities = 54/179 (30%), Positives = 76/179 (42%)
Frame = +1
Query: 292 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 471
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 472 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 651
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 652 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGYNFSYYFT 828
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G S T
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIIT 282
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/242 (24%), Positives = 92/242 (38%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NH D+G ++ A+L +P S + Y + T H
Sbjct: 28 NHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFA 87
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
L+P +LG+ D+A+PR++ F + +G +YP
Sbjct: 88 IPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYP 146
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+S + G + D + + IS+ S D++P++ +
Sbjct: 147 PLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALV 206
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
TA +L +R FF A GGD +L+QHLF FGHPEVYI+ LP
Sbjct: 207 TATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPA 266
Query: 799 FG 804
G
Sbjct: 267 AG 268
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 84.6 bits (200), Expect = 3e-15
Identities = 63/242 (26%), Positives = 92/242 (38%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG Y +L P + + Y+++ T H
Sbjct: 48 DHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYA 107
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N L PL+LG+ D+AFPR+ + + G Y
Sbjct: 108 LPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYV 166
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 167 PLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLT 226
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP
Sbjct: 227 ASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPA 286
Query: 799 FG 804
G
Sbjct: 287 MG 288
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 84.6 bits (200), Expect = 3e-15
Identities = 54/173 (31%), Positives = 75/173 (43%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 465
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 646 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFG 296
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 83.8 bits (198), Expect = 5e-15
Identities = 67/253 (26%), Positives = 94/253 (37%), Gaps = 1/253 (0%)
Frame = +1
Query: 49 PPGCRNSARGNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVT 225
P G R + N++ IG LY +L P L+G D YN I T
Sbjct: 28 PGGFRLISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFT 86
Query: 226 AHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE 405
H L+P +L A D+ FPR++ +
Sbjct: 87 VHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYD 145
Query: 406 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 585
G +YPPL+ G + D + + IS+ S
Sbjct: 146 LAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLT 205
Query: 586 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 765
++P+F A+ I A A +L +R+ FF GGDP+L+QHLF FFG
Sbjct: 206 RMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFG 265
Query: 766 HPEVYILILPGFG 804
HPEVYI+ LP G
Sbjct: 266 HPEVYIIFLPAAG 278
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 83.0 bits (196), Expect = 8e-15
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Frame = +1
Query: 196 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 375
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 376 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 543
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 544 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 714
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 715 -AG------GGDPILYQHLF*FFGHPEVYILILPGFG 804
AG GG P+L+QHLF F GHPEVYI+++P G
Sbjct: 278 IAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALG 314
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 81.4 bits (192), Expect = 3e-14
Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 462
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 463 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 642
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVWGFFTTAILMIIA 196
Query: 643 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMG 250
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 301 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 480
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 481 LAIFS 495
LAI+S
Sbjct: 61 LAIYS 65
Score = 59.7 bits (138), Expect = 9e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 600 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 767
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 80.2 bits (189), Expect = 6e-14
Identities = 51/128 (39%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 433 YPPLSSNI 456
LS I
Sbjct: 129 KCKLSQII 136
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 79.0 bits (186), Expect = 1e-13
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Frame = +1
Query: 421 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 591
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 592 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 771
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 772 EVYILILPGFGY 807
EVY+LI+P FG+
Sbjct: 403 EVYVLIIPTFGF 414
Score = 39.5 bits (88), Expect = 0.10
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 252
NHK I Y EL +P S GD Y +VTAH
Sbjct: 59 NHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFF 118
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 354
N L+P +G+ D+A+PR+N+I F
Sbjct: 119 VVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 78.6 bits (185), Expect = 2e-13
Identities = 54/173 (31%), Positives = 73/173 (42%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 465
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 646 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFG 316
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 77.4 bits (182), Expect = 4e-13
Identities = 58/255 (22%), Positives = 92/255 (36%)
Frame = +1
Query: 31 RSXLVXPPGCRNSARGNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIY 210
R+ P G R + N+ ++G Y +L PG+ +
Sbjct: 40 RAVWATPMGWRYWSAVNNSEVGVWYALTALAFMLCAGVLAVLMRVQLAVPGNDFLSADRF 99
Query: 211 NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXX 390
N T H L+P +LGA D+ FPR++ +
Sbjct: 100 NQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMG 158
Query: 391 XXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXX 570
+ + +G +YPPL++ G D+ + L ++S
Sbjct: 159 SILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPP 216
Query: 571 XXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHL 750
+ +PL+ V + + +R + FFDP GGDP+L+QHL
Sbjct: 217 GMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHL 276
Query: 751 F*FFGHPEVYILILP 795
F FGHPEVYI+ LP
Sbjct: 277 FWIFGHPEVYIIFLP 291
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 77.0 bits (181), Expect = 6e-13
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 252
NHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 13 NHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFF 72
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 73 MVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 77.0 bits (181), Expect = 6e-13
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +1
Query: 688 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFG 229
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 76.6 bits (180), Expect = 7e-13
Identities = 49/171 (28%), Positives = 73/171 (42%)
Frame = +1
Query: 292 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 471
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 472 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 651
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 652 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAG 337
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 76.6 bits (180), Expect = 7e-13
Identities = 49/173 (28%), Positives = 75/173 (43%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 465
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 646 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 804
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FG
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFG 291
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 76.6 bits (180), Expect = 7e-13
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Frame = +1
Query: 292 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 468
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 469 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 648
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 649 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGYNFSY 819
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G F Y
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDY 286
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 76.2 bits (179), Expect = 1e-12
Identities = 57/242 (23%), Positives = 84/242 (34%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
+HK IG LY +L P + YN ++T HA
Sbjct: 31 DHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFL 90
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N +PL LG D+A PR+N G T Y
Sbjct: 91 IPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYY 150
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+ + G SV + L+ G+ S ++P+F ++
Sbjct: 151 PLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFA 208
Query: 619 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 798
T+ A + + L S F+P GG P+LYQ F F+ HP VY+++LP
Sbjct: 209 TSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPY 268
Query: 799 FG 804
G
Sbjct: 269 LG 270
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 74.1 bits (174), Expect = 4e-12
Identities = 55/215 (25%), Positives = 82/215 (38%), Gaps = 14/215 (6%)
Frame = +1
Query: 202 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 381
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 382 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 552
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 553 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 720
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 721 -------GGDPILYQHLF*FFGHPEVYILILPGFG 804
GG P+L+QHLF F+ HP VYI++LP G
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMG 304
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 72.9 bits (171), Expect = 9e-12
Identities = 63/255 (24%), Positives = 92/255 (36%), Gaps = 13/255 (5%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 258
NHKDIG LY EL + G+ + YN V+ H
Sbjct: 21 NHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFI 80
Query: 259 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 438
N LVPL +GA D+AFPR+N + + G T+Y
Sbjct: 81 SPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYA 139
Query: 439 PLSSN--IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
PL++ I G + +L + + +P+F ++
Sbjct: 140 PLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSI 199
Query: 613 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*F 759
+T + A+ IL +D L T++F D G +L+ HLF F
Sbjct: 200 NLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWF 259
Query: 760 FGHPEVYILILPGFG 804
FGHPEVYI+ P G
Sbjct: 260 FGHPEVYIVFFPALG 274
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 71.7 bits (168), Expect = 2e-11
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 16/227 (7%)
Frame = +1
Query: 172 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 351
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 352 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 516
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 517 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 696
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 697 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFG 804
TSFF P+G GG +L+QHLF FFGHPEVYI ILP G
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMG 300
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 4e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 439 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 619 TAFXXXXXXXXXAGAITILLTDR 687
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 273 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 398
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 67.7 bits (158), Expect = 3e-10
Identities = 46/174 (26%), Positives = 73/174 (41%)
Frame = +1
Query: 286 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 465
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 646 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGY 807
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG+
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGF 316
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 66.9 bits (156), Expect = 6e-10
Identities = 45/128 (35%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTV 134
Query: 433 YPPLSSNI 456
SS +
Sbjct: 135 KKICSSKM 142
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/49 (61%), Positives = 31/49 (63%)
Frame = +3
Query: 687 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWV*FLILFHKK 833
K KYIIF S W F+STFILIFWT SLYFNFT IW F F K
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSK 55
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 60.9 bits (141), Expect = 4e-08
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 79 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 252
N KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 10 NAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFF 69
Query: 253 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 432
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 519
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 583 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 762
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 763 GHPEVYILIL 792
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 603 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 755
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 44.4 bits (100), Expect = 0.004
Identities = 39/170 (22%), Positives = 62/170 (36%)
Frame = +1
Query: 292 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 471
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 472 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 651
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 652 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 801
+ L+D + F+ G P+ Y F F HPEVY+ ILP F
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAF 344
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.005
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +3
Query: 330 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 509
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 510 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 689
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 690 LKY 698
KY
Sbjct: 199 PKY 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 40.7 bits (91), Expect = 0.044
Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
Frame = +1
Query: 757 FFGHPEVYILILPGFG---YNFSYYFTRK 834
FFGHPEVYILILPGFG + +YY +K
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKK 30
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.55
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 466 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 645
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 646 XXXAGAITILLTDRNLNT 699
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 36.3 bits (80), Expect = 0.95
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 757 FFGHPEVYILILPGFG 804
FFGHPEVY+LILP FG
Sbjct: 1 FFGHPEVYVLILPVFG 16
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 721 GGDPILYQHLF*FFGHPEVYILILPGF--GYNF 813
G DP+L + LF F GHP VY +LP + YNF
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNF 256
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 161
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 6.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 727 DPILYQHLF*FFGHPEVYILILPGF 801
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 8.9
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 615 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 794
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 795 RI 800
I
Sbjct: 154 SI 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,713,894
Number of Sequences: 1657284
Number of extensions: 12253524
Number of successful extensions: 27586
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 25560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27299
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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