Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30895
         (824 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23ZB5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.6  
UniRef50_Q8I620 Cluster: Putative uncharacterized protein; n=1; ...    34   5.0  

>UniRef50_Q23ZB5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 846

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
 Frame = +1

Query: 121 IFKLLW-FNLQFCLRMSLIVKYEIN------RNFIMNYVKTQFVHYTFYYYIINFYRLRK 279
           +F++ W F L   L    ++ Y ++      +N I+NY+KT  + +  Y++ +    L +
Sbjct: 512 LFQISWSFMLPLSLLAIYLIVYLLSYFIIKKKNIIVNYIKTASIFFYLYFFPMVVTLLSR 571

Query: 280 SMNCIS 297
           SMNCI+
Sbjct: 572 SMNCIN 577


>UniRef50_Q8I620 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1066

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 267 IEIYNIIIKSIMNKLCLYIIHYEISIDFIFYY*RHSETKLEIK 139
           +E +NIII+ I  +  L    Y   I F+ YY RH    +E K
Sbjct: 792 VEYFNIIIRKIKKEFILLFSIYLYDISFLRYYFRHKNINIEKK 834


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,876,045
Number of Sequences: 1657284
Number of extensions: 13733804
Number of successful extensions: 26205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26200
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)