Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30893
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7JS72 Cluster: Possible type IV site-specific deoxyrib...    35   2.4  
UniRef50_Q9Y012 Cluster: Serine/threonine protein kinase, putati...    34   4.2  
UniRef50_Q6FC92 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_A7JS72 Cluster: Possible type IV site-specific
           deoxyribonuclease, methyltransferase and restriction
           subunits; n=1; Mannheimia haemolytica PHL213|Rep:
           Possible type IV site-specific deoxyribonuclease,
           methyltransferase and restriction subunits - Mannheimia
           haemolytica PHL213
          Length = 1000

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 538 NVDSIFDIFFQIMRFTNYSTSPYINTRGDLTIVQTTW-HTGCLKQQAILELYQRFQISNI 714
           N D I    F I R  +Y+ + Y   + D  I Q+ +    C     +LE+YQR Q   +
Sbjct: 356 NRDIISTPNFIIRRIIDYTVNEYCKGKNDSNIYQSKFADIACGSGAFLLEVYQRLQDILV 415

Query: 715 DYY 723
           DYY
Sbjct: 416 DYY 418


>UniRef50_Q9Y012 Cluster: Serine/threonine protein kinase, putative;
           n=1; Plasmodium falciparum 3D7|Rep: Serine/threonine
           protein kinase, putative - Plasmodium falciparum
           (isolate 3D7)
          Length = 587

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 558 IEY*INIS-KSFLIYHSQTFREH*Y*NYNALRLFGRSEPYFLCNFNFMSENQY 403
           I Y +N++ K  LIY S+  +E+ Y NY    +  +   YFLC FN  S + Y
Sbjct: 5   ILYDLNLTPKKNLIYKSKYIKEYTY-NYFNYVISNKEPKYFLCTFNHTSVSSY 56


>UniRef50_Q6FC92 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter sp. ADP1|Rep: Putative uncharacterized
           protein - Acinetobacter sp. (strain ADP1)
          Length = 436

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 595 TSPYINTRGDLTIVQTTWHTGCLKQQAILELYQRFQISNIDYY 723
           TSP  N +G   +V  TW  G      + +L+Q FQ + ID Y
Sbjct: 236 TSPS-NLKGQAGVVSVTWENGLRPYAEMQDLFQAFQNNGIDVY 277


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,761,078
Number of Sequences: 1657284
Number of extensions: 12134645
Number of successful extensions: 21947
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21943
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)