Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30890
         (702 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UIX6 Cluster: DEAD-box family helicase, putative; n=2...    34   3.9  
UniRef50_A7RGE0 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.9  
UniRef50_Q9SNA4 Cluster: Receptor-like protein kinase homolog; n...    33   9.0  

>UniRef50_Q4UIX6 Cluster: DEAD-box family helicase, putative; n=2;
            Theileria|Rep: DEAD-box family helicase, putative -
            Theileria annulata
          Length = 1724

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -2

Query: 587  IKNTLRKLIILKYKSLKQVTEQQVQNNL*RLWPNRQSRRSHCPKDKALGVLLV 429
            +K  L K    KY    +VT + V +N   L+P+R+S    C K K LG LL+
Sbjct: 1364 VKTKLLKRDDKKYYKENKVTVEAVNSNYKLLFPSRRSINDDCGKFKVLGPLLL 1416


>UniRef50_A7RGE0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 727

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
 Frame = -2

Query: 665 RMIDASTSYFFMYIINQTYGKSVLLLIKNTLRKLIILKYKSLKQVTEQQVQNNL*RLWPN 486
           R+   S  +    I  +++G  V + +    +   +  Y   ++V   +V+N    L PN
Sbjct: 413 RIFGVSNIHLSKEIAAESFGLYVNITVGAMSKSTSVQPYGKKRKVIWDEVRN-FSILVPN 471

Query: 485 RQSRRSHCPKDKALGVLLVSSDATMP*YKSLEQLPIFLMRYIQKKCSQKTFITMKKKIKH 306
           + S   +C     + V+    +   P Y+ + ++ + L + I+K+ + +TF    K+ KH
Sbjct: 472 KIS---NCLNRVKIAVIGFDQEMPRPKYRLMGKIELHLHKIIKKQWTMETFEMQNKETKH 528

Query: 305 S--VCIEYS 285
           S  + +E++
Sbjct: 529 SGDISVEFA 537


>UniRef50_Q9SNA4 Cluster: Receptor-like protein kinase homolog; n=3;
           Arabidopsis thaliana|Rep: Receptor-like protein kinase
           homolog - Arabidopsis thaliana (Mouse-ear cress)
          Length = 819

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 467 HCPKDKALGVLLVSSDATMP*YKSLEQLPIFLMRYIQKKCSQKTFITM 324
           H P+  +L + LV + AT+P   +LE  P+    YI K  S K +  M
Sbjct: 152 HIPRSNSLQICLVKTGATIPMISALELRPLANDTYIAKSGSLKYYFRM 199


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,763,892
Number of Sequences: 1657284
Number of extensions: 10801472
Number of successful extensions: 23929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23925
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)