Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30885
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0342 - 3016705-3016884,3016963-3017031,3017322-3017408,301... 58 7e-09
02_01_0053 + 397406-397609,398483-398561,398648-398742,399289-39... 50 1e-06
09_04_0505 + 18183203-18183294,18183388-18183436,18183719-181840... 33 0.31
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 32 0.55
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 31 1.3
10_07_0068 + 12573683-12573919,12574010-12574160,12575230-12575675 29 2.9
04_04_1042 - 30346132-30346285,30346629-30346759,30346867-303469... 29 2.9
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 2.9
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 29 2.9
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 29 2.9
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 29 3.9
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420... 29 5.1
12_02_0196 - 15374814-15374997,15375304-15375547,15376035-153762... 28 6.7
10_01_0057 + 797732-797793,797819-797914,798816-799012,799730-80... 28 6.7
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 28 6.7
01_01_0473 - 3478660-3480338,3480507-3480609 28 6.7
08_01_0117 + 941334-941339,941720-941906,942444-942565,942648-94... 28 8.9
02_03_0382 + 18352508-18352841,18353817-18354028,18354190-183542... 28 8.9
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320... 28 8.9
01_05_0141 - 18532695-18532709,18533255-18533365,18533585-185336... 28 8.9
>08_01_0342 -
3016705-3016884,3016963-3017031,3017322-3017408,
3017603-3017650,3017783-3017873,3018243-3018322,
3018429-3018533,3019457-3019551,3019710-3019788,
3020214-3020402
Length = 340
Score = 58.0 bits (134), Expect = 7e-09
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Frame = +1
Query: 259 ELEHQKYRMSIINAALKRLEKKGGVKDERVTNLEKEIMKRKAMLHE--IKATLP-KQNSL 429
E E + R + + A L RL K D +E+++ + ++ + I A LP K +
Sbjct: 34 EEEALRRRAAALGAELARLRKAAAHADS--DKVEEDLDRATCLISDGDIAALLPSKTHGT 91
Query: 430 YLRIILGNVNVSI----LXXXXXXXXXXXXXXXXLILSAIAFILAVGNLYI-----DFRP 582
+L++ LG VN+ + L+ IL V ++ P
Sbjct: 92 FLKMFLGPVNLRAPRKEVQLKVKEEYNSYRDRTALLFLGFPMILLVLRSWLWNGCFPVLP 151
Query: 583 LQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRLHHFISTVVAGILLIW 735
+QL +LL + Y TL +RE+IL+VNGS I+ WW HH+ + +++ I L W
Sbjct: 152 VQLYQAWLL-FLYTTLALRENILRVNGSDIRPWWMCHHYCAMLMSLISLTW 201
>02_01_0053 +
397406-397609,398483-398561,398648-398742,399289-399393,
399496-399575,399832-399922,400021-400128,400529-400615,
400862-400972
Length = 319
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Frame = +1
Query: 280 RMSIINAALKRLEKK-GGVKDERVTNLEKEIMKRKAMLHE--IKATLP-KQNSLYLRIIL 447
R + ++A L+RL+ + + +E+E+ + + + + + A LP K+N +L+ +
Sbjct: 43 RATALDADLRRLQASLSTLAPTTLDKVEEELERARVTISDSDVAAFLPSKRNGKFLKTFV 102
Query: 448 GNVNVSI------LXXXXXXXXXXXXXXXXLILSAIAFILAVGNLYIDFRPLQLILIFL- 606
G VNV + L +L +L ++ P + ++
Sbjct: 103 GPVNVRVARKEDKLRVKDEYNNYRDRAAYMFLLFPSILLLLRWWIWDGCLPALAVQMYQA 162
Query: 607 -LVWYYCTLTIRESILKVNGSRIKGWWRLHHFISTVVAGILLIW 735
L++ Y + +RE++L VNGS I+ WW HH+++ ++A + L W
Sbjct: 163 WLLFLYTSFALRENVLIVNGSDIRPWWIYHHYLAMLMALVSLTW 206
>09_04_0505 +
18183203-18183294,18183388-18183436,18183719-18184003,
18184914-18185135,18185272-18185421
Length = 265
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = +1
Query: 133 EVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQAACLKELEHQKYRMSIINAALKR 312
+V++ K+ E+L A ++L + K+ K E L+ EH R+S NAA+
Sbjct: 68 QVDQAQKQREELAALQEQLSGLQKKLLEKDE--------ALRSAEHLISRISAANAAVDE 119
Query: 313 LEKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPK 417
L + K+ ++ + E+ K L E +A L K
Sbjct: 120 LRGQLTEKESQIESTGSELHGAKIQLAEKQAALEK 154
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 31.9 bits (69), Expect = 0.55
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 127 KMEVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQAACLKELEHQKYRMSIINAAL 306
K EEC K ++ A ++E + + LE+ + + C KE+E QK ++ +N +
Sbjct: 1302 KHNFEECQKFHDE--AQKAKMEA-ERLHNLLLEKQVDAEI-CKKEIEMQKTEIANLNQKI 1357
Query: 307 KRL-EKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPKQNSL 429
L E GV ++ E+ KA L E A L + L
Sbjct: 1358 SELVENSRGVDLSTYETMKDELQNIKATLRENSAELERTKKL 1399
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +1
Query: 181 KRLETINKEYTTKLEEVGELQAAC---LKELEHQ--KYRMSI--INAALKRLEKKGGVKD 339
K +E++ ++ + E++ +C KE E + KYR + + +K+LE K
Sbjct: 362 KEMESVYNKHAKRQEDLENNMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKDT 421
Query: 340 ERVTNLEKEIMKRKAMLHEIKATLPK 417
++ KE+ + +++ +++ +PK
Sbjct: 422 SKIDESTKEVEESSSLIPQLEEEIPK 447
>10_07_0068 + 12573683-12573919,12574010-12574160,12575230-12575675
Length = 277
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 127 KMEVEECVKEWEDLVADYKRLETINKEYTTKLEEVG 234
K +VEE + EW D YKRL+ + + ++ +VG
Sbjct: 8 KKQVEESLPEWRDKFLAYKRLKKLVRLVSSSSGDVG 43
>04_04_1042 -
30346132-30346285,30346629-30346759,30346867-30346938,
30347284-30347370,30347479-30347505,30347777-30347869,
30348470-30348558,30348649-30348727,30349102-30349231,
30349344-30349464,30349619-30349726,30349837-30350152
Length = 468
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 559 NLYIDFRPLQLILIFLLVWYYCTLTIRES 645
N ++D L L+L+F+L +Y+C L +R S
Sbjct: 77 NWHLDLFCLILLLVFVLPYYHCYLLLRNS 105
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 184 RLETINKEYTTKLEEVGELQAACLKELEHQKYRMSIINAALKRLEKKGGVKDERVTNLEK 363
+L+ IN+ T K E + QAA L + + R + AL GV+ + VT+LEK
Sbjct: 70 KLDEINQALTQKEEILKREQAAHLNAISEYERREESMRKAL-------GVEKQCVTDLEK 122
Query: 364 EIMKRKAMLHEIK 402
+ + + + E+K
Sbjct: 123 ALREIRGEIAEVK 135
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +1
Query: 133 EVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQA---ACLKELEHQKYRMSIINAA 303
E+ C E+ AD + ++ E ++E L+ + KELE + + S++
Sbjct: 672 ELTLCKIILEEDKADRSEMMRLSGELQRMVQETDALKNEKDSLQKELERVEEKSSLLREK 731
Query: 304 LKRLEKKG-GVKDERVTNLEKEIMKRKAMLHEIKATLPKQNS 426
L KKG G+ ER L++ + ++K+ + ++K L ++N+
Sbjct: 732 LSMAVKKGKGLVQER-EGLKQVLDEKKSDIEKLKHALDEKNA 772
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 211 TTKLEEVGELQAACLKELEHQKYR-------MSIINAALKRLEKKGGVKDERVTNLEKEI 369
++++E + E + KELE KY M + +AL+ + + E + EKEI
Sbjct: 425 SSQIEAICEEKDKLAKELESSKYECEKVRKAMEDMASALQEMSAEARESQENYLHKEKEI 484
Query: 370 MKRKAMLHEIKATLPKQNSLYLRIILGNVN 459
+A L E+ +L Y ++L N
Sbjct: 485 EHTRAKLQELNISLNNTRDNY-EVMLDEAN 513
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/99 (19%), Positives = 41/99 (41%)
Frame = +1
Query: 130 MEVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQAACLKELEHQKYRMSIINAALK 309
+ +E + E L A L ++NK L+ + C L+H++ ++ + +
Sbjct: 288 LAAQEWKTKAESLQARLHELSSLNKSNEDSLQSLTSSFDECKSMLQHEQSQVVQLKEKVS 347
Query: 310 RLEKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPKQNS 426
LEK+ E + + H+++AT+ + S
Sbjct: 348 SLEKEAREYKECFLETNRRLDVATKESHQLQATIDRLTS 386
>03_05_0469 +
24640925-24641081,24641292-24641644,24641870-24642043,
24642382-24642506,24643011-24643059,24643741-24643899,
24644037-24644219
Length = 399
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 127 KMEVEECVKEWEDLVADYKRLETINKEYTTKLEE--VGELQAACLKELEHQKYRMSII 294
K +EE K++ ++ ++ K LET +K++ +LEE +L + + + HQ+ R +++
Sbjct: 237 KAAIEEAEKQYSEICSEMKCLETKSKQF-EELEERYCHDLNSFQFQWISHQEERDAVL 293
>12_02_0196 -
15374814-15374997,15375304-15375547,15376035-15376237,
15377275-15377502,15377674-15377819,15378020-15378233,
15378410-15378543,15378986-15379135,15379892-15380155,
15380962-15381051
Length = 618
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 148 VKEWEDLVADYKRLETINKEYTTKLEEV 231
+K WEDL +D +ETI Y +E++
Sbjct: 500 IKSWEDLTSDKDAIETIRAIYGDDVEKL 527
>10_01_0057 +
797732-797793,797819-797914,798816-799012,799730-800892
Length = 505
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 220 LEEVGELQAACLKELEHQKYRMSIINAALKRLEKKGGVKDERVTNLEKEIMKRKAMLHEI 399
LEE+G L CL E ++ M + A L L + +K E N+ ++ + + E+
Sbjct: 413 LEEIGRLAMECLNEKIDERPDMKEVVARLMMLRRSRKLKQENY-NISRQQFFEENSIDEL 471
Query: 400 KATLPKQNSLYLRIILGNV 456
+ +S +L N+
Sbjct: 472 PKSFDDNSSSSSAELLSNL 490
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 175 DYKRLETINKEYTTK--LEEVGELQAACLKELEHQKYRMSIINAALKRLEKKGGVKDERV 348
D ++ E I TT LE VG + ELE + M ++ AAL+ ++ K + +
Sbjct: 394 DLRKEENIQGSVTTSNHLESVG-----AVAELEKLRREMKMMEAALQGAARQSQSKADEI 448
Query: 349 TNLEKEIMKRKAMLHEIKA 405
L E + K+ + ++K+
Sbjct: 449 ARLMNENEQLKSTIDDLKS 467
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/104 (21%), Positives = 49/104 (47%)
Frame = +1
Query: 115 LNHPKMEVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQAACLKELEHQKYRMSII 294
L H E+E+C KE E + Y ++ + KL+++ + L ++ +K + +
Sbjct: 244 LAHHDHEIEKCKKELEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQ---L 300
Query: 295 NAALKRLEKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPKQNS 426
A +K LE+ D+ +IMK + ++ +++ L ++
Sbjct: 301 KAQVKELEQASRSLDDS----SAQIMKLQEIIKDLQRRLDNDSN 340
>08_01_0117 +
941334-941339,941720-941906,942444-942565,942648-942656,
942965-943067,943204-943247,943487-943516,943615-943737,
943816-943841,943934-944015,944137-944178,944259-944292,
944424-944451,944779-945022,945023-945124,945318-945443,
945533-945715,945803-945961
Length = 549
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 180 VICY*ILPFLHTFFNFHLWVVQVFSQQFL 94
++C + L FF H W+V+ FSQ+FL
Sbjct: 364 IMCLIVTLSLRAFFKMH-WLVKRFSQEFL 391
>02_03_0382 +
18352508-18352841,18353817-18354028,18354190-18354277,
18355017-18355474
Length = 363
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 342 TRHKPREGDNEEESDASRDKSHAPQTEQ 425
++ + +EGD+E+E + +D S+A + E+
Sbjct: 283 SKEEKKEGDDEKEKEKEKDDSNAAEVEE 310
>02_03_0238 +
16730444-16730448,16730484-16730586,16732043-16732099,
16732198-16732346,16732450-16732545,16732620-16732695,
16732810-16732883,16732991-16733408
Length = 325
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 256 KELEHQKYRMSIINAALKRLEKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPKQNSLYL 435
KE +H K + I KR K + +E + KE+ K +M HE++ P+Q ++L
Sbjct: 17 KEFDHPKLQADTIG---KRFLWKC-ISEEELLQATKELDKELSM-HEMRRNTPRQEKIFL 71
Query: 436 R 438
+
Sbjct: 72 Q 72
>01_05_0141 -
18532695-18532709,18533255-18533365,18533585-18533617,
18534011-18534140,18534219-18535660,18535990-18536358
Length = 699
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 142 ECVKEWEDLVADYKRLETINKEYTTKLEEVGEL 240
EC W+D ++ + +T+ TT+ +EV L
Sbjct: 289 ECESSWQDFLSPLRHAQTVTILVTTRSKEVARL 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,509,778
Number of Sequences: 37544
Number of extensions: 308080
Number of successful extensions: 935
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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