Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30881
(757 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 46 4e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 42 6e-04
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 41 8e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 41 8e-04
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 39 0.004
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 39 0.004
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 38 0.005
At1g11110.1 68414.m01272 expressed protein 33 0.27
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 0.36
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 32 0.47
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 32 0.47
At3g46290.1 68416.m05010 protein kinase, putative similar to rec... 31 0.83
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 31 0.83
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 31 1.1
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 30 1.4
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 30 1.4
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 1.4
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 30 1.4
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 30 1.4
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 30 1.9
At3g02150.2 68416.m00185 TCP family transcription factor, putati... 30 1.9
At3g02150.1 68416.m00184 TCP family transcription factor, putati... 30 1.9
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 29 2.5
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 2.5
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 29 2.5
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 2.5
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 29 3.3
At5g24580.2 68418.m02903 copper-binding family protein similar t... 29 3.3
At5g24580.1 68418.m02902 copper-binding family protein similar t... 29 3.3
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 29 3.3
At5g54480.1 68418.m06784 hypothetical protein 29 4.4
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 29 4.4
At4g32330.2 68417.m04600 expressed protein 29 4.4
At4g32330.1 68417.m04599 expressed protein 29 4.4
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 4.4
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 29 4.4
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 29 4.4
At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kina... 29 4.4
At5g40450.1 68418.m04905 expressed protein 28 5.8
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 28 5.8
At3g25870.1 68416.m03223 expressed protein 28 5.8
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 28 5.8
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 28 5.8
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 28 5.8
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 7.7
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 28 7.7
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 28 7.7
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 28 7.7
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 558 SYSSHRRYLLLRHMKSHSEDRPHKCGV--CERGFKTIASLQNHLNMHNGVKPHVC 716
++ SH+ L++H + HS+DRP KC C+ FK S H+ +H G +P+VC
Sbjct: 1270 NFFSHK--YLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC 1322
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 576 RYLLLRHMKSHSEDRPHKCGV--CERGFKTIASLQNHLNMHNGVKPHVCK 719
+YL+L H + H ++RP +C C FK + HL +H G +P++CK
Sbjct: 1253 KYLVL-HQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICK 1301
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 531 RPCFTCNF--CSYSSHRRYLLLRHMKSHSEDRPHKCGV--CERGFKTIASLQNH 680
RP F C++ CS + ++ H++ H+ +RP+ C V C F+ ++ H
Sbjct: 1266 RP-FECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRH 1318
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKSHSEDRPH---KCGV--CERGFKTIASLQNHLN-MHNGVKP 707
C C S H + + RH+++H ED KC V C F ++LQ H+ +H+ ++P
Sbjct: 277 CEICG-SKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 335
Query: 708 HVCKF 722
VC F
Sbjct: 336 FVCGF 340
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 543 TCNFCSYSSHRRYLLLRHMKSHSEDRPHKCGV--CERGFKTIASLQNHLNMHNGVKPHVC 716
TC C + L +HM+SHS +R C V C ++ L HL H G K C
Sbjct: 67 TCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKC 125
Query: 717 --KFCNSPFTTSGEL 755
+ C S F+ G +
Sbjct: 126 PKENCKSEFSVQGNV 140
Score = 35.1 bits (77), Expect = 0.051
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Frame = +3
Query: 483 SEAKKAQPQTKKGKFLRPCFTCNFCSYSSHRRYLLLRHMKSH-----SEDRP-------- 623
+E K +T K +R + C +C S + YL+ +H++SH E+R
Sbjct: 2 AEEAKVDVKTSAKKDIRN-YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDE 60
Query: 624 -----HKCGVCERGFKTIASLQNHLNMHNGVKPHVC 716
H C C FK A L+ H+ H+ + C
Sbjct: 61 ESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTC 96
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKSHSEDRPH---KCGV--CERGFKTIASLQNHLN-MHNGVKP 707
C C S H + + RH+++H ED KC V C F ++LQ H+ +H+ ++P
Sbjct: 189 CEICG-SKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 247
Query: 708 HVCKF 722
VC F
Sbjct: 248 FVCGF 252
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKS--HSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCK 719
C C +RR L+ HMK HS +P +CGVC + K+ S++ HLN+ + + CK
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKS--HSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCK 719
C C +RR L+ HMK HS +P +CGVC + K+ S++ HLN+ + + CK
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 570 HRRYLLLRHMK-SHSEDRPHKCGVCERGFKTIASLQNHLNMH 692
+R+YL R S S+ RP+ C CERGF +L H+N+H
Sbjct: 2 NRKYLDRRSYSWSGSQARPYICEFCERGFSNAQALGGHMNIH 43
>At1g11110.1 68414.m01272 expressed protein
Length = 146
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +3
Query: 75 DEETTTVITMESEDEPDTGVTYF-----VDEEGRYYYQPTGNNQDLVPLQTEATETTNKD 239
D E +I +E +D+ + F VDEE +Y + + EA + N++
Sbjct: 3 DNEGNLIIEIEDDDDMVMYSSIFTNLNQVDEENQYIVEEADEENQVEAENEEAQISENEE 62
Query: 240 S-ISDAAEDVLMSNESEQYQTVTLVPSENSGGEVSYVLVVQ 359
I + + ++MS+ EQY T + E+ V LVV+
Sbjct: 63 FVIQEQPKKLIMSDVWEQYLTTAEIRKEDMNRLVMNFLVVE 103
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 645 RGFKTIASLQNHLNMHNGVKPHVCKFCNSPFTTSGE 752
R K +LQ H +GV+P C+ C F G+
Sbjct: 319 RPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGD 354
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 654 KTIASLQNHLNMHNGVKPHVCKFCNSPFTTSGE 752
K +LQ H +G+KP +C+ C F G+
Sbjct: 283 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGD 315
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 609 SEDRPHKCGVCERGFKTIASLQNHLNMHNGVKP 707
S++ P+KC VCE+ F + +L H H +KP
Sbjct: 101 SKNLPYKCNVCEKAFPSYQALGGHKASHR-IKP 132
>At3g46290.1 68416.m05010 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 830
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 174 PTGNNQDLVPLQTEATETTNKDSISDAAEDVLMSNESEQYQTVTLVPSENSGGEVSYVLV 353
P G+N+ V + T ++I + E + M+N Q T T VP +S + + L+
Sbjct: 348 PKGSNKVRVSIGPSTVHTDYPNAIVNGLEIMKMNNSKGQLSTGTFVPGSSSSSKSNLGLI 407
Query: 354 V 356
V
Sbjct: 408 V 408
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 588 LRHMKSHSEDRPHKCGVCERGFKTIASLQNHLNMH 692
+R K + HKC +C R F T SL H +H
Sbjct: 786 MRPKKLAPSGKIHKCSICHREFSTGQSLGGHKRLH 820
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKS--HSEDRPHKCGVCERGFKTIASLQNHL 683
C C ++ L+ HMK HS P CGVC++ ++ SL+ HL
Sbjct: 17 CAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 591 RHMKSHSEDRPHKCGVCERGFKTIASLQNHLNM--HNGVKPHVCKFC 725
R SE +KC C R F + L H+ + H+G +P C C
Sbjct: 4 RSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVC 49
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKSHSED------RPHKCGVCERGFKTIASLQNHLNMH 692
C S S+ +RH ++ S R ++C C+RGF +L H+N+H
Sbjct: 3 CERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIH 57
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 546 CNFCSYSSHRRYLLLRHMKS--HSEDRPHKCGVCERGFKTIASLQNHL 683
C C +++ L+ HM+ HS P CG+C + ++ SL+ HL
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREHL 54
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCKFCNSPFTT 743
R + C C R FK+ +L H+N+H + + + SP +T
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSST 94
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 603 SHSEDRPHKCGVCERGFKTIASLQNHLNMH 692
S ++ R + C C RGF +L H+N+H
Sbjct: 28 SLNQSRSYVCSFCIRGFSNAQALGGHMNIH 57
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 45 NRKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDE-EGRYYYQPTGNNQDLVPLQTEAT 221
+RKEK+ + EE+ V + EDEPD + ++E +G + N + L+ A
Sbjct: 59 DRKEKRNSGLTEESHKVDGNDDEDEPDWMRNFTLNEADGANGDKSIKNTKSPFSLRKHAK 118
Query: 222 ETTNKDSISDAAED 263
E + +D D
Sbjct: 119 EVFTEGEKADELND 132
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 609 SEDRPHKCGVCERGFKTIASLQNHLNMHNG 698
S+++ H+CG+C F + +L H+ H G
Sbjct: 224 SKNKVHECGICGAEFTSGQALGGHMRRHRG 253
>At3g02150.2 68416.m00185 TCP family transcription factor, putative
similar to transcription factor PCF6 [Oryza sativa
(japonica cultivar-group)] GI:20975255; contains Pfam
profile PF03634: TCP family transcription factor
Length = 355
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 307 LFRQRTAAVKSATSSWCKKRLNLSTLILKSIRMKKRSPKTCIT--LKRRRLRQTLPT 471
+ +++ ++ S++SSW K + + ++ K R K C L+ RR+R ++PT
Sbjct: 42 VIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98
>At3g02150.1 68416.m00184 TCP family transcription factor, putative
similar to transcription factor PCF6 [Oryza sativa
(japonica cultivar-group)] GI:20975255; contains Pfam
profile PF03634: TCP family transcription factor
Length = 278
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 307 LFRQRTAAVKSATSSWCKKRLNLSTLILKSIRMKKRSPKTCIT--LKRRRLRQTLPT 471
+ +++ ++ S++SSW K + + ++ K R K C L+ RR+R ++PT
Sbjct: 42 VIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 15/64 (23%)
Frame = +3
Query: 609 SEDRPHKCGVCERGFKTIASLQNHLNMHNG---------------VKPHVCKFCNSPFTT 743
+E +KCGVC + F + +L H H VK HVC C F T
Sbjct: 70 AEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFAT 129
Query: 744 SGEL 755
L
Sbjct: 130 GQAL 133
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 624 HKCGVCERGFKTIASLQNHLNMH 692
H C +C +GFK A+L+ H+ H
Sbjct: 217 HYCQICGKGFKRDANLRMHMRAH 239
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 609 SEDRPHKCGVCERGFKTIASLQNHLNMHNG 698
S ++ H+CG+C F + +L H+ H G
Sbjct: 256 SNNKVHECGICGAEFTSGQALGGHMRRHRG 285
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMH 692
R + C C R FK+ +L H+N+H
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVH 61
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 1192
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 156 GRYYYQPTGNNQDLVPLQTEATETTNKDSISDAAEDVLMSNESEQYQTVTLVPSENSGGE 335
GR TG+ + L + T A + D+I + + + S E+ Q + +P EN E
Sbjct: 448 GRPIPVETGSGERLPSIDTRAPRMRDLDAIIEDSHEDEPSGENGTDQADSSLPGENVPVE 507
Query: 336 VSYV 347
SYV
Sbjct: 508 TSYV 511
>At5g24580.2 68418.m02903 copper-binding family protein similar to
copper homeostasis factor gi:3168840 from Arabidopsis
thaliana; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 318
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 48 RKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGR----YYYQPTGNNQDLVPLQTE 215
+K++ ++N +E E+ D +T EEG YYYQP+ + + P Q
Sbjct: 248 KKKEGEENGEEGGGEEAAATEEERRDNEMTAMAQEEGMKRMMYYYQPSYVIERIPPPQLF 307
Query: 216 ATETTNKDSIS 248
+ E N IS
Sbjct: 308 SDENPNACCIS 318
>At5g24580.1 68418.m02902 copper-binding family protein similar to
copper homeostasis factor gi:3168840 from Arabidopsis
thaliana; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 319
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 48 RKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGR----YYYQPTGNNQDLVPLQTE 215
+K++ ++N +E E+ D +T EEG YYYQP+ + + P Q
Sbjct: 249 KKKEGEENGEEGGGEEAAATEEERRDNEMTAMAQEEGMKRMMYYYQPSYVIERIPPPQLF 308
Query: 216 ATETTNKDSIS 248
+ E N IS
Sbjct: 309 SDENPNACCIS 319
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 603 SHSEDRPHKCGVCERGFKTIASLQNHLNMHNGV 701
S ++ H+C +C+ F + +L H+ H G+
Sbjct: 185 SKKPEKTHECSICKAEFSSGQALGGHMRRHRGL 217
>At5g54480.1 68418.m06784 hypothetical protein
Length = 720
Score = 28.7 bits (61), Expect = 4.4
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 45 NRKEKKKDNMDEETTTVITMESED-EPDTGVTYFVDEEGRYYYQPTGNNQDLVPLQTEAT 221
N+K+KKK N+ E ++ ++ D E +T DE ++ + TE
Sbjct: 227 NKKKKKKKNVRESSSVASEIDKRDVEANTCNGQVADETDNSNEACAQETENTPEIVTEEV 286
Query: 222 ETTNKDSISDAAEDVLMSNESEQYQTVTLVPSENSGGEVSYVLVVQEETKPI 377
++++ A D +S+E+ Y++ + SE+SG ++ + V E I
Sbjct: 287 TRSDEEVEVVARSDEEVSDEA--YESSSSCFSESSGSGLTDLRKVVERINSI 336
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 597 MKSHSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCKF 722
+K ++++ KC C R F T +L H N H + +F
Sbjct: 46 IKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRF 87
>At4g32330.2 68417.m04600 expressed protein
Length = 436
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 24 SGVMPPGNRKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLVP 203
+ ++P R EKKK D ET + +E+E V+ D E + N+D
Sbjct: 364 AAIIPAKVRPEKKKLEKDAETVNQTSHPTEEEAQVTVSSNADVEDSHETVSPRMNEDRAD 423
Query: 204 LQTEATE 224
E +E
Sbjct: 424 KSIEVSE 430
>At4g32330.1 68417.m04599 expressed protein
Length = 437
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 24 SGVMPPGNRKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLVP 203
+ ++P R EKKK D ET + +E+E V+ D E + N+D
Sbjct: 365 AAIIPAKVRPEKKKLEKDAETVNQTSHPTEEEAQVTVSSNADVEDSHETVSPRMNEDRAD 424
Query: 204 LQTEATE 224
E +E
Sbjct: 425 KSIEVSE 431
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMHNG 698
R H C C R F T+ + H MH+G
Sbjct: 322 RLHGCKTCGRKFGTLKGVYGHQRMHSG 348
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMH 692
R + C +C+RGF +L H N+H
Sbjct: 19 RTYDCDICKRGFTNPQALGGHNNIH 43
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMH 692
R + C C+R F++ +L H+N+H
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVH 69
>At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1456
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 198 VPLQTEATETTNKDSISDAAEDVLMSNESEQ 290
V + T+ + T+N DSI ++ ED NE +Q
Sbjct: 534 VSVDTDVSTTSNLDSIRESEEDTAEKNEDKQ 564
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/101 (23%), Positives = 47/101 (46%)
Frame = +3
Query: 21 PSGVMPPGNRKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLV 200
PS V+ ++ +K ++ + + E+ T +T +E QP N+
Sbjct: 945 PSEVLEESSKTVDEKIEEKTDSIELGEIAQEERSVTDLTPLQEESS----QP---NEQEK 997
Query: 201 PLQTEATETTNKDSISDAAEDVLMSNESEQYQTVTLVPSEN 323
+ E E TN++ SD +VL ++ S++ + T+V +EN
Sbjct: 998 ETKLEKHEPTNEEVKSDEVIEVLSASPSKELEGETVVEAEN 1038
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 618 RPHKCGVCERGFKTIASLQNHLNMH 692
R + C C R F++ +L H+N+H
Sbjct: 38 RSYTCNFCRREFRSAQALGGHMNVH 62
>At3g25870.1 68416.m03223 expressed protein
Length = 170
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +3
Query: 24 SGVMPPGNRKEKKKDNMDEE--TTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDL 197
SG+ P + + + E TTT E +PD G + ++ P Q L
Sbjct: 42 SGLDPVSQDLDSVMKSFENELSTTTAALSSGETQPDLGYLFEASDDELGLPPPLTPPQTL 101
Query: 198 VPLQTEATETTNKDSISDAAE 260
+P E T T + SD++E
Sbjct: 102 LPPSCEETVTELVRASSDSSE 122
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 624 HKCGVCERGFKTIASLQNHLNMH 692
H+CG+C + F T +L H H
Sbjct: 284 HRCGLCHKVFSTYQTLGGHQTFH 306
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 624 HKCGVCERGFKTIASLQNHLNMH 692
H C +C +GFK A+L+ H+ H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 624 HKCGVCERGFKTIASLQNHLNMH 692
H C +C +GFK A+L+ H+ H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 177 TGNNQDLVPLQTEATETTNKDSISDAAEDVLMSNESEQYQTVTLVPSENSGGEVSYVLVV 356
T N + + + TT +S++ A + + + E T + P+EN+ E
Sbjct: 1254 TPNTETATSTENTSQTTTTPESVTTAPPEPITTAPPETVTTTAVKPTENAATERRVTNYP 1313
Query: 357 QEETKPINLD 386
++PI+ D
Sbjct: 1314 PIRSQPIDFD 1323
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 621 PHKCGVCERGFKTIASLQNH 680
P+ CGVC+R F T L NH
Sbjct: 116 PYFCGVCDRRFYTNEKLINH 135
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 606 HSEDRPHKCGVCERGFKTIASLQNHLNMH 692
+ E+ HKC +C++ F T +L H+ H
Sbjct: 87 NKENDMHKCTICDQMFGTGQALGGHMRKH 115
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 624 HKCGVCERGFKTIASLQNHLNMH 692
HKC +C + F T +L H+ H
Sbjct: 94 HKCSICSQSFGTGQALGGHMRRH 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,201,836
Number of Sequences: 28952
Number of extensions: 302768
Number of successful extensions: 1253
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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