Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30880
         (366 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0HH75 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q2H3E1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q54PD8 Cluster: Putative uncharacterized protein; n=1; ...    31   8.6  
UniRef50_A0C9Q0 Cluster: Chromosome undetermined scaffold_16, wh...    31   8.6  

>UniRef50_Q0HH75 Cluster: Putative uncharacterized protein; n=1;
           Shewanella sp. MR-4|Rep: Putative uncharacterized
           protein - Shewanella sp. (strain MR-4)
          Length = 869

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 39  TENHPS*SGQHRAAQPRFEQLELALTNQ 122
           T NHPS + Q +   P+F +LELAL N+
Sbjct: 26  TPNHPSVTRQAQRLGPKFSRLELALENR 53


>UniRef50_Q2H3E1 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 195

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -3

Query: 124 GWLVNANSSCSNRGCAARCCPDYDGWFSVFXAAAS 20
           GW V+ N++ + +G + + CP+ DG ++++ A  +
Sbjct: 130 GWAVDENNNLTFKGTSLQACPNADGSWAIWLAGVT 164


>UniRef50_Q54PD8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 757

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 13  FDRTPPQXTLRTIHHNQDNIERRNHDSNN 99
           F+ +PP   L   HHN +N    N+++NN
Sbjct: 411 FNNSPPSSPLSYSHHNNNNNNNNNNNNNN 439


>UniRef50_A0C9Q0 Cluster: Chromosome undetermined scaffold_16, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_16,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1039

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 25  PPQXTLRTIHHNQDNIERRNHDSNN 99
           PPQ +       +D I++RNHDSNN
Sbjct: 479 PPQSSRTLTSAQKDKIDQRNHDSNN 503


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,828,583
Number of Sequences: 1657284
Number of extensions: 2776050
Number of successful extensions: 8584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8571
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)