BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30880 (366 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 1.7 AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 5.2 AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 20 9.1 AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 20 9.1 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 22.2 bits (45), Expect = 1.7 Identities = 8/25 (32%), Positives = 10/25 (40%) Frame = -3 Query: 133 CLVGWLVNANSSCSNRGCAARCCPD 59 C + N N+ C C CPD Sbjct: 693 CTTCFCENGNNKCFTMECPQVTCPD 717 >AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B protein. Length = 351 Score = 20.6 bits (41), Expect = 5.2 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 27 AAXNTENHPS*SGQHRAAQ 83 AA N +NH +G H AQ Sbjct: 315 AATNNQNHHHHAGHHIHAQ 333 >AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein protein. Length = 314 Score = 19.8 bits (39), Expect = 9.1 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +2 Query: 113 DQPTNQANKSSS 148 D+P N +NKS+S Sbjct: 28 DEPENLSNKSNS 39 >AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax protein. Length = 314 Score = 19.8 bits (39), Expect = 9.1 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -3 Query: 112 NANSSCSNRGCAARCCPDYDGWFSVFXAAA 23 N+N S +++ ++ D +G+ SV AAA Sbjct: 86 NSNYSSNSKPDCSKGNADQNGYASVVAAAA 115 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 50,877 Number of Sequences: 336 Number of extensions: 752 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 122,585 effective HSP length: 50 effective length of database: 105,785 effective search space used: 7510735 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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