BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30880 (366 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014297-2408|AAF55467.1| 1493|Drosophila melanogaster CG14318-P... 27 7.5 AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 27 7.5 >AE014297-2408|AAF55467.1| 1493|Drosophila melanogaster CG14318-PA protein. Length = 1493 Score = 27.1 bits (57), Expect = 7.5 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 19 RTPPQXTLRTIHHNQDNIERRNHDSNN 99 R P T + + HN +NI N+++NN Sbjct: 81 RANPPLTYQHLTHNNNNINNNNNNNNN 107 >AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB, isoform B protein. Length = 2133 Score = 27.1 bits (57), Expect = 7.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 28 PQXTLRTIHHNQDNIERRNHDSN 96 PQ T +++HN N+E R DS+ Sbjct: 436 PQPTRSSLYHNPYNVESRERDSS 458 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,686,649 Number of Sequences: 53049 Number of extensions: 133459 Number of successful extensions: 348 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 348 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 943048980 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -