Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30879
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    28   0.067
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.62 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 0.067
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 645 IYNPKRNIKQHNPYKFTAPTLST 577
           +YNP  +I+Q  PY    PT ST
Sbjct: 284 VYNPPDHIQQATPYSAPGPTYST 306


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 14/56 (25%), Positives = 21/56 (37%)
 Frame = +3

Query: 18   CATGPSCRTATPLAITHETTTSTSQLPHSSKIPLPAVTNTGKLWSSHYRTCMIYFL 185
            C  G       P   T + TT+    P    +P   V   G+L+ +    C  Y+L
Sbjct: 2199 CILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVPCQGRLFVADDTNCAQYYL 2254


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 275 HYVHYLKRILITQIKDLIVM 334
           +Y+H+  ++L+  I D+I+M
Sbjct: 157 NYIHFFYQLLLYLITDMILM 176


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 41  DGYATCYNPRDNDV 82
           D Y  C+ PR+N +
Sbjct: 399 DEYNVCFRPRNNSI 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,743
Number of Sequences: 336
Number of extensions: 3862
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)