BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30878 (573 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 34 2.7 UniRef50_Q23U98 Cluster: DNA-directed RNA polymerase, beta subun... 33 3.6 UniRef50_Q184A3 Cluster: Phage protein; n=7; root|Rep: Phage pro... 33 6.3 UniRef50_A5Z6D5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3 >UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm) Length = 248 Score = 33.9 bits (74), Expect = 2.7 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 500 DGDHLPSGGPYARLPTKAIKK 562 DG+H PSG PYA LPT+A K Sbjct: 3 DGNHSPSGRPYASLPTRAKMK 23 >UniRef50_Q23U98 Cluster: DNA-directed RNA polymerase, beta subunit family protein; n=6; Tetrahymena thermophila SB210|Rep: DNA-directed RNA polymerase, beta subunit family protein - Tetrahymena thermophila SB210 Length = 685 Score = 33.5 bits (73), Expect = 3.6 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = -2 Query: 290 TVTLLDNEKKNSQLSHRYYSLRLLNNYITFKNRQYSVGLETNH 162 T+T + + NS + R SLR+++N F+N+Q+S LET H Sbjct: 148 TMTGISKQLPNSSIPARIASLRMVSNTPIFRNQQHS-SLETRH 189 >UniRef50_Q184A3 Cluster: Phage protein; n=7; root|Rep: Phage protein - Clostridium difficile (strain 630) Length = 436 Score = 32.7 bits (71), Expect = 6.3 Identities = 27/87 (31%), Positives = 42/87 (48%) Frame = -2 Query: 287 VTLLDNEKKNSQLSHRYYSLRLLNNYITFKNRQYSVGLETNHTITFTGGRTXL*VRAGRY 108 VTLLDN+K ++Q++ L+ N+YIT+K LE + + FTGG V Y Sbjct: 135 VTLLDNKKVDTQIAKVITDLQ-DNDYITWKK---DATLEASAGLVFTGGTNGEAVTGAEY 190 Query: 107 HHRAYFCREAVMRFGLKGGAAVVTILR 27 +A+ + F G A T ++ Sbjct: 191 --QAFLDKIESYSFNALGCLATTTEIK 215 >UniRef50_A5Z6D5 Cluster: Putative uncharacterized protein; n=1; Eubacterium ventriosum ATCC 27560|Rep: Putative uncharacterized protein - Eubacterium ventriosum ATCC 27560 Length = 360 Score = 32.3 bits (70), Expect = 8.3 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -2 Query: 281 LLDNEKKNSQLSHRYYSLRLLNNYITFKNR 192 L+D +K + + RY S R+LNNYI F N+ Sbjct: 313 LIDGYRKITVIDIRYVSSRILNNYIKFDNQ 342 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 529,903,941 Number of Sequences: 1657284 Number of extensions: 9649886 Number of successful extensions: 20798 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 20267 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20783 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 39154548218 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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