BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30874 (792 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 268 2e-72 U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 268 2e-72 AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 247 8e-66 U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 166 1e-41 U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 8e-18 U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 55 5e-08 U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.033 U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 36 0.033 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.033 L16621-5|AAA28230.1| 214|Caenorhabditis elegans Hypothetical pr... 31 1.2 U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.7 AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.7 AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 29 5.0 >U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical protein C14F11.1b protein. Length = 297 Score = 268 bits (658), Expect = 2e-72 Identities = 125/212 (58%), Positives = 161/212 (75%) Frame = +3 Query: 156 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 335 T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68 Query: 336 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 515 E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128 Query: 516 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPE 695 F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187 Query: 696 GSIILLHACAHNPTGVDPKPNDWEQLSKVIKE 791 GS ILLHACAHNPTGVDP + W+++S ++K+ Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKISDIVKK 219 >U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical protein C14F11.1a protein. Length = 414 Score = 268 bits (658), Expect = 2e-72 Identities = 125/212 (58%), Positives = 161/212 (75%) Frame = +3 Query: 156 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 335 T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68 Query: 336 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 515 E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128 Query: 516 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPE 695 F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187 Query: 696 GSIILLHACAHNPTGVDPKPNDWEQLSKVIKE 791 GS ILLHACAHNPTGVDP + W+++S ++K+ Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKISDIVKK 219 >AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical protein C44E4.3 protein. Length = 419 Score = 247 bits (604), Expect = 8e-66 Identities = 111/204 (54%), Positives = 153/204 (75%) Frame = +3 Query: 180 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 359 W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ + Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81 Query: 360 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 539 ++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K + Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140 Query: 540 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 719 +K ++ PTPTW NH + L + YRY++ +T GFD++GALEDISK+PEGS+ILLHA Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHA 200 Query: 720 CAHNPTGVDPKPNDWEQLSKVIKE 791 CAHNPTGVDP W++LS+V+KE Sbjct: 201 CAHNPTGVDPTKEQWKKLSQVLKE 224 >U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical protein T01C8.5 protein. Length = 408 Score = 166 bits (404), Expect = 1e-41 Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 2/206 (0%) Frame = +3 Query: 177 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 353 ++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI + Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61 Query: 354 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 533 LNHEY P+ G + A +L G +SP IK + + VQ LSGTGALR G EF+ Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120 Query: 534 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIIL 710 K +++ PTWGNH + Y ++D ++ L D+ PE S+I+ Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVII 180 Query: 711 LHACAHNPTGVDPKPNDWEQLSKVIK 788 LH CAHNPTG+DP W+ +++VIK Sbjct: 181 LHGCAHNPTGMDPTQEQWKLVAEVIK 206 >U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical protein T01C8.4 protein. Length = 357 Score = 87.8 bits (208), Expect = 8e-18 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%) Frame = +3 Query: 177 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 353 ++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63 Query: 354 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 533 NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ + Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122 Query: 534 AKAKEIWLPTP 566 K I++ P Sbjct: 123 LSMKTIYVSNP 133 Score = 31.9 bits (69), Expect = 0.54 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +3 Query: 726 HNPTGVDPKPNDWEQLSKVIKE 791 +NPTG+DP W Q+++VIK+ Sbjct: 138 YNPTGMDPTREQWIQMAQVIKQ 159 >U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical protein C14E2.2 protein. Length = 364 Score = 55.2 bits (127), Expect = 5e-08 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +3 Query: 576 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVDPK 752 +H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150 Query: 753 PNDWEQLSKVIK 788 N W+Q+++VIK Sbjct: 151 ENQWKQIARVIK 162 >U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical protein K06A9.1c protein. Length = 825 Score = 35.9 bits (79), Expect = 0.033 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = -3 Query: 496 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 317 +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G Sbjct: 34 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 91 Query: 316 KTNGFPSSSLYA 281 T+G SSS YA Sbjct: 92 STSGAASSSSYA 103 >U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein K06A9.1a protein. Length = 1032 Score = 35.9 bits (79), Expect = 0.033 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = -3 Query: 496 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 317 +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298 Query: 316 KTNGFPSSSLYA 281 T+G SSS YA Sbjct: 299 STSGAASSSSYA 310 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 35.9 bits (79), Expect = 0.033 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = -3 Query: 496 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 317 +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298 Query: 316 KTNGFPSSSLYA 281 T+G SSS YA Sbjct: 299 STSGAASSSSYA 310 >L16621-5|AAA28230.1| 214|Caenorhabditis elegans Hypothetical protein ZK688.3 protein. Length = 214 Score = 30.7 bits (66), Expect = 1.2 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +3 Query: 39 LVXPPGCRXFGTRVKMAQVLKKLTTQVLKPNNVDTIVGCT 158 +V PPGC+ V++ V+ K +++ K + +D I G T Sbjct: 53 IVAPPGCQNLHQEVELGVVISKKASRISKSDAMDYIGGYT 92 >U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate receptor protein1 protein. Length = 1025 Score = 30.3 bits (65), Expect = 1.7 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -3 Query: 745 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 596 +TP+G CA N ++E S IFD I S P S PL L + YF C L + Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462 >AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ionotropic glutamatereceptor NMR-1 protein. Length = 1025 Score = 30.3 bits (65), Expect = 1.7 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -3 Query: 745 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 596 +TP+G CA N ++E S IFD I S P S PL L + YF C L + Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462 >AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical protein Y51A2D.18 protein. Length = 550 Score = 28.7 bits (61), Expect = 5.0 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -2 Query: 419 FSYSISICGLTTDGSILMIESSTMENFFCLSDRRQNKWFSLIISICSNTKIYFF 258 F+ S +I G T GSI +I MEN ++ W ++ I+ N IY + Sbjct: 182 FTISRTIVGFFTGGSISIINVFIMENI----PKKHRMWINMAITWSPNMPIYSY 231 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,954,391 Number of Sequences: 27780 Number of extensions: 478432 Number of successful extensions: 1274 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1264 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1924757034 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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