BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30874 (792 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 227 9e-60 At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 227 9e-60 At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 225 3e-59 At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 219 2e-57 At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 219 2e-57 At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 192 2e-49 At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 190 1e-48 At4g37235.1 68417.m05271 expressed protein 30 1.5 At3g54460.1 68416.m06025 SNF2 domain-containing protein / helica... 29 3.5 At3g54000.3 68416.m05969 expressed protein 28 6.2 At3g54000.2 68416.m05968 expressed protein 28 6.2 At3g54000.1 68416.m05970 expressed protein 28 6.2 At4g39840.1 68417.m05645 expressed protein 28 8.2 At1g80570.3 68414.m09449 F-box family protein (FBL14) contains s... 28 8.2 At1g80570.2 68414.m09447 F-box family protein (FBL14) contains s... 28 8.2 At1g80570.1 68414.m09448 F-box family protein (FBL14) contains s... 28 8.2 At1g75530.1 68414.m08778 forkhead-associated domain-containing p... 28 8.2 >At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast / transaminase A (ASP5) (AAT1) nearly identical to SP|P46248 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana} Length = 453 Score = 227 bits (554), Expect = 9e-60 Identities = 103/203 (50%), Positives = 138/203 (67%) Frame = +3 Query: 183 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 362 + + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ RG Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112 Query: 363 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKA 542 N EY PI G A + A A+L FG PVIK + T+Q LSGTG+LRL I +++ A Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172 Query: 543 KEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHAC 722 K + + +PTWGNH I N +P +YRY+DPKT G D +G + DI + PEGS ILLH C Sbjct: 173 KVV-ISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGC 231 Query: 723 AHNPTGVDPKPNDWEQLSKVIKE 791 AHNPTG+DP P W +++ VI+E Sbjct: 232 AHNPTGIDPTPEQWVKIADVIQE 254 >At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast / transaminase A (ASP5) (AAT1) nearly identical to SP|P46248 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana} Length = 453 Score = 227 bits (554), Expect = 9e-60 Identities = 103/203 (50%), Positives = 138/203 (67%) Frame = +3 Query: 183 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 362 + + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ RG Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112 Query: 363 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKA 542 N EY PI G A + A A+L FG PVIK + T+Q LSGTG+LRL I +++ A Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172 Query: 543 KEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHAC 722 K + + +PTWGNH I N +P +YRY+DPKT G D +G + DI + PEGS ILLH C Sbjct: 173 KVV-ISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGC 231 Query: 723 AHNPTGVDPKPNDWEQLSKVIKE 791 AHNPTG+DP P W +++ VI+E Sbjct: 232 AHNPTGIDPTPEQWVKIADVIQE 254 >At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial / transaminase A (ASP1) identical to SP|P46643 Aspartate aminotransferase, mitochondrial precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana} Length = 430 Score = 225 bits (550), Expect = 3e-59 Identities = 103/210 (49%), Positives = 134/210 (63%) Frame = +3 Query: 159 GLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE 338 GLR+ S+WW +V+ P D ILG+TEA+ D P+KVN+GVGAYRDD GKP VL VR+AE Sbjct: 25 GLRSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAE 84 Query: 339 EILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEF 518 + L EY P+ G A D KLA+G++S IK+K VQTLSGTGA RL +F Sbjct: 85 KRLAGSTFM-EYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADF 143 Query: 519 ITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEG 698 K ++ +I++P PTW NH I +P K Y Y+ P+T G D ++D+ PEG Sbjct: 144 -QKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEG 202 Query: 699 SIILLHACAHNPTGVDPKPNDWEQLSKVIK 788 S LLHACAHNPTGVDP W ++S++ K Sbjct: 203 SFFLLHACAHNPTGVDPTEEQWREISQLFK 232 >At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic isozyme 1 / transaminase A (ASP2) identical to SP|P46645 Aspartate aminotransferase, cytoplasmic isozyme 1 (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana} Length = 405 Score = 219 bits (535), Expect = 2e-57 Identities = 102/203 (50%), Positives = 134/203 (66%), Gaps = 1/203 (0%) Frame = +3 Query: 183 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEE-ILHSRG 359 ++NV P D ILG+T AY D P K+NLGVGAYR +EGKP VL VRKAE+ +++ Sbjct: 5 FSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPS 64 Query: 360 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 539 EY PI G + + AKL G DSP I TVQ LSGTG+LR+G EF+ HY + Sbjct: 65 RVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQ 124 Query: 540 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 719 + I++P PTWGNHP++ N L + +RY+DP T G D +G LED+ P G+I+LLHA Sbjct: 125 SV-IYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHA 183 Query: 720 CAHNPTGVDPKPNDWEQLSKVIK 788 CAHNPTGVDP WEQ+ ++++ Sbjct: 184 CAHNPTGVDPTSEQWEQIRQLMR 206 >At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast / transaminase A (ASP3) (YLS4) identical to SP|P46644 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}; identical to cDNA YLS4 mRNA for aspartate aminotransferase (ASP3), partial cds GI:13122285 Length = 449 Score = 219 bits (534), Expect = 2e-57 Identities = 105/203 (51%), Positives = 134/203 (66%), Gaps = 1/203 (0%) Frame = +3 Query: 183 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEE-ILHSRG 359 ++++ P D ILG+T AY KD P K+NLGVGAYR +EGKP VL VRKAE+ +++ R Sbjct: 49 FSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRT 108 Query: 360 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 539 EY PI G + AKL G DSP I+ TV+ LSGTG+LR+G EF+ KHY + Sbjct: 109 RIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQ 168 Query: 540 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 719 K I++ PTWGNHP+I L K YRY+DP T G + QG LED+ GSI+LLHA Sbjct: 169 -KTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHA 227 Query: 720 CAHNPTGVDPKPNDWEQLSKVIK 788 CAHNPTGVDP WEQ+ K+++ Sbjct: 228 CAHNPTGVDPTIQQWEQIRKLMR 250 >At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana] Length = 403 Score = 192 bits (469), Expect = 2e-49 Identities = 89/201 (44%), Positives = 126/201 (62%) Frame = +3 Query: 186 NNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLN 365 ++V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L + L+ Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQL-ANDLD 64 Query: 366 HEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKAK 545 EY P++G + KL G+DSP +K T Q LSGTG+LR+G EF+ H K Sbjct: 65 KEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHN-KES 123 Query: 546 EIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACA 725 I++P PTWGNHP+I L + +RY+DPK+ G D +G LED+ P G+I++L ACA Sbjct: 124 VIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQACA 183 Query: 726 HNPTGVDPKPNDWEQLSKVIK 788 HNPTGVDP WE++ ++++ Sbjct: 184 HNPTGVDPTFEQWEKIRRLVR 204 >At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana] Length = 405 Score = 190 bits (462), Expect = 1e-48 Identities = 88/202 (43%), Positives = 125/202 (61%), Gaps = 1/202 (0%) Frame = +3 Query: 186 NNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL-HSRGL 362 ++V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L + Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLSR 65 Query: 363 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKA 542 + EY P++G + KL G+DSP +K T Q LSGTG+LR+G EF+ H K Sbjct: 66 DKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHN-KE 124 Query: 543 KEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHAC 722 I++P PTWGNHP+I L + +RY+DPK+ G D +G LED+ P G+I++L AC Sbjct: 125 SVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQAC 184 Query: 723 AHNPTGVDPKPNDWEQLSKVIK 788 AHNPTGVDP WE++ ++++ Sbjct: 185 AHNPTGVDPTFEQWEKIRRLVR 206 >At4g37235.1 68417.m05271 expressed protein Length = 152 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Frame = -2 Query: 485 GQCLYSTVALIF----DDRAVFSKSQFSYSISICGLTTDGSILM 366 GQ L+S+ +L+F DD ++ + F Y +++ GL T S+ + Sbjct: 19 GQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTL 62 >At3g54460.1 68416.m06025 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein similar to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00646: F-box domain Length = 1378 Score = 29.1 bits (62), Expect = 3.5 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 444 VIKNKSNCTVQTLSGTGALRLGLEFITKHYAKAKEIW 554 + +N ++C + G+GAL L L F+T H + IW Sbjct: 1238 MFQNDADCMALLMDGSGALGLDLSFVT-HVFLMEPIW 1273 >At3g54000.3 68416.m05969 expressed protein Length = 301 Score = 28.3 bits (60), Expect = 6.2 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -1 Query: 663 PANRNHWSWDRSNGISCAAS*GCC 592 PA +H +W+ + C A GCC Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCC 120 >At3g54000.2 68416.m05968 expressed protein Length = 301 Score = 28.3 bits (60), Expect = 6.2 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -1 Query: 663 PANRNHWSWDRSNGISCAAS*GCC 592 PA +H +W+ + C A GCC Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCC 120 >At3g54000.1 68416.m05970 expressed protein Length = 352 Score = 28.3 bits (60), Expect = 6.2 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -1 Query: 663 PANRNHWSWDRSNGISCAAS*GCC 592 PA +H +W+ + C A GCC Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCC 120 >At4g39840.1 68417.m05645 expressed protein Length = 451 Score = 27.9 bits (59), Expect = 8.2 Identities = 24/94 (25%), Positives = 36/94 (38%) Frame = +3 Query: 81 KMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPK 260 K + LKKL + N+ +I L SS+ N + PP L + KK + P Sbjct: 136 KTSSELKKLNSGTKSTNSTSSIKKSADLSKSSSSKNKTTIKPPSSKLSSPPSEKK-SQPS 194 Query: 261 KVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 362 + + E KPF L + + R L Sbjct: 195 SKPVTKSKQSEKEIKPFWLDDEEDEDFVSEFRDL 228 >At1g80570.3 68414.m09449 F-box family protein (FBL14) contains similarity to F-box protein FBL2 GI:6063090 from [Homo sapiens] Length = 467 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +3 Query: 636 PKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVD 746 P F LQG + I K P + L H C N G++ Sbjct: 340 PSLFSFTLQGIITLIQKCPVRELSLDHVCVFNDMGME 376 >At1g80570.2 68414.m09447 F-box family protein (FBL14) contains similarity to F-box protein FBL2 GI:6063090 from [Homo sapiens] Length = 480 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +3 Query: 636 PKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVD 746 P F LQG + I K P + L H C N G++ Sbjct: 353 PSLFSFTLQGIITLIQKCPVRELSLDHVCVFNDMGME 389 >At1g80570.1 68414.m09448 F-box family protein (FBL14) contains similarity to F-box protein FBL2 GI:6063090 from [Homo sapiens] Length = 467 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +3 Query: 636 PKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVD 746 P F LQG + I K P + L H C N G++ Sbjct: 340 PSLFSFTLQGIITLIQKCPVRELSLDHVCVFNDMGME 376 >At1g75530.1 68414.m08778 forkhead-associated domain-containing protein / FHA domain-containing protein Length = 555 Score = 27.9 bits (59), Expect = 8.2 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 546 EIWLPTPTWGNHPQICN 596 EIW+P P + HP+I N Sbjct: 231 EIWIPPPPYDPHPEIVN 247 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,989,802 Number of Sequences: 28952 Number of extensions: 445552 Number of successful extensions: 1153 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1141 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1785055200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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