Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30873
(660 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 1.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 1.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 1.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 2.2
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 23 2.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 3.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.8
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.8
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 6.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.8
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 6.8
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 9.0
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 9.0
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.0
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 9.0
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.0
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 9.0
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 9.0
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 165 PRRPPNCSARVDEAFPTAGHSHSKGS 242
P PNC + P +GH S+ S
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTS 162
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = +1
Query: 160 CSRAAHQTALRGSTKPSPQLATLTPKVRAFVERSAALCQPEHVH 291
C Q + S+ LA +TP V + +++C P H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 165 PRRPPNCSARVDEAFPTAGHSHSKGS 242
P PNC + P +GH S+ S
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTS 162
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = +1
Query: 160 CSRAAHQTALRGSTKPSPQLATLTPKVRAFVERSAALCQPEHVH 291
C Q + S+ LA +TP V + +++C P H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 165 PRRPPNCSARVDEAFPTAGHSHSKGS 242
P PNC + P +GH S+ S
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTS 162
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = +1
Query: 160 CSRAAHQTALRGSTKPSPQLATLTPKVRAFVERSAALCQPEHVH 291
C Q + S+ LA +TP V + +++C P H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 429 PHVHML*SGERRGPLGSRRPEVRPGELHLP 518
PH H + P G RR RPG + P
Sbjct: 24 PHQHQHYGAAVQVPQGGRRRAARPGVVTTP 53
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 164 AAPPTKLLCEGRRSLPHSWPLSL 232
A PPT LC LP PL L
Sbjct: 163 ALPPTGFLCNNYPPLPQVPPLPL 185
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 137 LFVTLFIKNTILKSLVQ 87
LFV L + N +LK LV+
Sbjct: 160 LFVLLIVSNVVLKILVE 176
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 420 PGNVCRVCPG 391
PG C+ CPG
Sbjct: 101 PGRCCKTCPG 110
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 236 KMASMNIVPYHMSPYGHP 253
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 68 KMASMNIVPYHMSPYGHP 85
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 565 KGRTMYVIPFSMGPVGSP 618
K +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 217 AVGKASSTLAEQF 179
AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 56 WRNTREFYNKI 24
W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 56 WRNTREFYNKI 24
W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 217 AVGKASSTLAEQF 179
AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 56 WRNTREFYNKI 24
W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 217 AVGKASSTLAEQF 179
AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 164 AAPPTKLLCEGRRSLPHSWPLSL 232
A PP LC LP PL L
Sbjct: 163 ALPPAGFLCNNYLPLPQVPPLPL 185
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,378
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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