Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30871
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591 125 4e-29
10_08_0422 - 17796916-17797167,17797328-17797453,17797546-177977... 108 5e-24
01_06_1496 + 37772838-37772935,37773039-37773243,37773649-377737... 61 9e-10
01_01_0549 - 4051257-4051709,4051967-4052075,4053194-4053252,405... 47 2e-05
02_02_0597 - 11996350-11996483,11997511-11997604,11997877-119980... 42 5e-04
03_05_0988 - 29458789-29459776,29459875-29460035,29460134-294602... 40 0.001
02_02_0578 + 11745811-11746013,11749902-11750241,11750325-117505... 37 0.013
06_01_0213 + 1628974-1629339,1629441-1629590,1630935-1631095,163... 32 0.37
01_01_0655 - 5001495-5002392,5002493-5002653,5002779-5003184,500... 32 0.37
05_03_0492 - 14688449-14689445,14689910-14690070,14690690-14691022 32 0.48
02_02_0576 + 11730171-11730466,11733096-11733435,11733530-117337... 31 0.64
11_06_0060 - 19695338-19695477,19695641-19695734,19695818-196959... 31 0.84
06_02_0276 + 13678457-13678734,13679592-13679931,13680025-136802... 31 0.84
05_02_0035 - 5872635-5873538,5873679-5873839,5873958-5874077,587... 31 0.84
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 28 6.0
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 28 6.0
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443... 28 7.9
>09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591
Length = 455
Score = 125 bits (301), Expect = 4e-29
Identities = 71/206 (34%), Positives = 115/206 (55%)
Frame = +3
Query: 12 RQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEAL 191
+Q V T+ + +R + +++ + LA ++ A+NLGQGFP++ P V EA
Sbjct: 59 QQQPVQSTLGPGVTVAKRLEKFKTTIFTQMSMLAIKHG-AINLGQGFPNFDGPDFVKEAA 117
Query: 192 SQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTIL 371
Q + +QY RG+G+P L +++ + G Q+D E+ VTSG EA+ +TIL
Sbjct: 118 IQAINAGK---NQYARGYGVPELNSAIAERFLKDSGLQVDPEKEVTVTSGCTEAIAATIL 174
Query: 372 GHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEAELASLF 551
G ++ GDEVI+ P++D Y+ + AG + I L+P D+ + EL +
Sbjct: 175 GLINPGDEVILFAPFYDSYEATLSMAGANVKAITLRP---------PDFSVPLEELKAAV 225
Query: 552 NNRTKMIIVNTPHNPLGKVFTQRELE 629
+ T+ I++NTPHNP GK+FT+ ELE
Sbjct: 226 SKNTRAIMINTPHNPTGKMFTREELE 251
>10_08_0422 -
17796916-17797167,17797328-17797453,17797546-17797700,
17797793-17797907,17798022-17798118,17798274-17798368,
17798500-17798585,17798689-17798819,17798909-17799090
Length = 412
Score = 108 bits (259), Expect = 5e-24
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Frame = +3
Query: 93 VEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGL-PRLVEN 269
++ + A+ AVNL +GFPD+ AP HV A + ++ L+QY G+ L E
Sbjct: 17 IQQLSHLAQRAGAVNLAEGFPDFPAPAHVKAAAAAAIAAD---LNQYRHVQGICDALAET 73
Query: 270 LSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCA 449
+ + + G ++D + V G EA + I +D GDEV++ +P F+ Y ++ A
Sbjct: 74 MKRDH----GLRVDPLTDFAVCCGQSEAFAAAIFAIIDQGDEVLLFDPAFETYQTCIELA 129
Query: 450 GGVPRFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQREL 626
GVP ++ L P W L+E + F NRTK +++N+PHNP GKVF++ EL
Sbjct: 130 RGVPVYVPLDPP---------SWTLNEDKFLKSFTNRTKAVVLNSPHNPTGKVFSREEL 179
>01_06_1496 +
37772838-37772935,37773039-37773243,37773649-37773742,
37773830-37773933,37774370-37774618,37774706-37774819,
37775010-37775093,37775292-37775462,37775544-37775657,
37775751-37775894
Length = 458
Score = 60.9 bits (141), Expect = 9e-10
Identities = 49/183 (26%), Positives = 81/183 (44%)
Frame = +3
Query: 126 PAVNLGQGFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQ 305
P + L G PD+ P + EA A + +YT G L + + G
Sbjct: 82 PVIGLAAGEPDFDTPHVIAEA-GMNAIKDG--YTRYTPNAGTLELRKAICNKLQEENGIS 138
Query: 306 IDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPK 485
+++LV++GA + + +L GDEV+I PY+ Y M AG P +
Sbjct: 139 YSP-DQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTS-- 195
Query: 486 PQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELETHCRSVQEAQRA 665
S +++L LAS N +++++I+ +P NP G V+ + LE V++ R
Sbjct: 196 ------ISENFLLRPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRL 249
Query: 666 LSL 674
L L
Sbjct: 250 LVL 252
>01_01_0549 -
4051257-4051709,4051967-4052075,4053194-4053252,
4053339-4053445,4053711-4053867,4054110-4054169,
4055396-4055524,4056027-4056074,4057148-4057214,
4057948-4058006
Length = 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 5/200 (2%)
Frame = +3
Query: 45 KFRLPERYGAGEKSVWVEYI---QLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSEN 215
+F L A + S W E +L K ++L QG + P+ + +I
Sbjct: 22 RFGLAFEQKAQKVSAWEEQNAMQELLRGNKDVMSLAQGVVYWQPPEAAMNKIKEIVWE-- 79
Query: 216 PLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDE 395
P + +Y GLP L E L + L + I+VTSGA +A + +L D GD
Sbjct: 80 PSISKYGSDDGLPELREALLE---KLRRENKLTKSSIMVTSGANQAFVNVVLTLCDAGDA 136
Query: 396 VIIIEPYFDCYDFMVKCAGGVPRFI--ALKPKPQGDDISSADWVLDEAELASLFNNRTKM 569
V++ PY+ +M GV + A P+ D+ + VL E N K+
Sbjct: 137 VVMFAPYY-FNSYMSFQMTGVTDILVGASNPETLHPDVDWLEKVLQEN------NPIPKL 189
Query: 570 IIVNTPHNPLGKVFTQRELE 629
+ V P NP G + LE
Sbjct: 190 VSVVNPGNPSGAFIPKPMLE 209
>02_02_0597 -
11996350-11996483,11997511-11997604,11997877-11998032,
11998580-11998639,11998733-11998951,11999038-11999377,
12001240-12001571
Length = 444
Score = 41.9 bits (94), Expect = 5e-04
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Frame = +3
Query: 123 KPAVNLGQG----FPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSP 290
+P + L G FP++ +A++ S + + Y G GLP ++ S
Sbjct: 62 RPVLPLAHGDPSVFPEFRTAAEAEDAVADALRSGD--FNCYPAGVGLPAARRAVADHLSR 119
Query: 291 LIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFI 470
+ ++ + ++I +T+G +A+ I G +++ P + Y+ + A F
Sbjct: 120 DLPYKLSS-DDIFLTAGGTQAIEVVISILAQPGTNILLPRPGYPNYE--ARAA-----FN 171
Query: 471 ALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELETHCRSVQ 650
L+ + D I W +D L S+ + T I++ P+NP G V+T H V
Sbjct: 172 NLEVR-HFDLIPEKGWEIDLNSLESIADKNTTAIVIINPNNPCGNVYTYE----HLSKVA 226
Query: 651 EAQRALSL 674
E R L +
Sbjct: 227 EVARKLGI 234
>03_05_0988 -
29458789-29459776,29459875-29460035,29460134-29460271,
29460367-29460543
Length = 487
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 GLPRLVENLSKVYSPLIGRQI--DAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYF 419
GLP L++ S G ++ D N I++T+GA A + + D GD +I PY+
Sbjct: 99 GLPAFKNALARFMSEQRGYKVVFDPSN-IVLTAGATSANEALMFCLADHGDAFLIPTPYY 157
Query: 420 DCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEA-ELASLFNNRTKMIIVNTPHNP 596
+D +K G G ++ LD+A A R K +++ P NP
Sbjct: 158 PGFDRDLKWRTGAEIVPVHCASANGFRVTRP--ALDDAYRRAQKRRLRVKGVLITNPSNP 215
Query: 597 LGKVFTQRELET 632
LG + +LET
Sbjct: 216 LGTASPRADLET 227
>02_02_0578 +
11745811-11746013,11749902-11750241,11750325-11750543,
11751043-11751102,11751262-11751417,11751518-11751611,
11751914-11751927
Length = 361
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/119 (24%), Positives = 49/119 (41%)
Frame = +3
Query: 318 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 497
N+I +TSG +A+ I G +++ +P F Y+ + R L P+
Sbjct: 85 NDIYLTSGCVQAIEVMISVLAQPGSNILLPKPGFPLYESRTTFSNLEVRHFDLIPE---- 140
Query: 498 DISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELETHCRSVQEAQRALSL 674
W +D + ++ + T I+V P NP G V++ H + E R L L
Sbjct: 141 ----RGWEVDLEGVQAIADENTVAIVVINPSNPCGSVYSY----DHLAKIAETARKLGL 191
>06_01_0213 +
1628974-1629339,1629441-1629590,1630935-1631095,
1631178-1631892,1632045-1632091,1632295-1632316
Length = 486
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/104 (21%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +3
Query: 318 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 497
+++++TSGA A+ D G+ ++ PY+ +D +K G+ + P D
Sbjct: 191 SQVVITSGATPAMEILSFCLADPGNAFLVPSPYYPGWDRDIKWRTGIE--LIPVPCRSTD 248
Query: 498 DISSADWVLDEA-ELASLFNNRTKMIIVNTPHNPLGKVFTQREL 626
+ + + L+ A A + + ++++ P+NP G ++ L
Sbjct: 249 NFNISITALEIAYNQAKKRGIKVRGVLISNPNNPTGSFVPKQTL 292
>01_01_0655 -
5001495-5002392,5002493-5002653,5002779-5003184,
5003523-5003572,5004710-5004727
Length = 510
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +3
Query: 318 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 497
+ I++T+GA A + GD ++I PY+ +D ++ GV G
Sbjct: 177 DHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGF 236
Query: 498 DISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELE 629
++ A E A++ R + +++ P NPLG ++ L+
Sbjct: 237 QVTVAALQAAYDEAAAV-GMRARAVLITNPSNPLGTTVRRKMLD 279
>05_03_0492 - 14688449-14689445,14689910-14690070,14690690-14691022
Length = 496
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +3
Query: 318 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 497
+ I++T+GA A D D ++I PY+ +D ++ GV G
Sbjct: 130 DRIVLTAGATAANELLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVPVHCDSANGF 189
Query: 498 DISSA--DWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELE 629
+++A DEA A + R + +++ P NPLG + LE
Sbjct: 190 QVTAAALQAAHDEAAAAGM---RVRGVLITNPSNPLGTTARREALE 232
>02_02_0576 +
11730171-11730466,11733096-11733435,11733530-11733748,
11734687-11734746,11734847-11735096,11735314-11735441
Length = 430
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/118 (21%), Positives = 51/118 (43%)
Frame = +3
Query: 321 EILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDD 500
++++T+G A+ + G V++ P + Y +G R L P
Sbjct: 117 DVVLTAGCNHAVEIMMSVLASPGANVLLPRPGYPLYASRAALSGLEFRHFDLLP------ 170
Query: 501 ISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELETHCRSVQEAQRALSL 674
++W +D A + +L + T +++ P+NP G V+++ H + E R L +
Sbjct: 171 --DSEWEVDLAGVEALADANTVAMVIVNPNNPCGCVYSR----DHLAKIAETARKLGI 222
>11_06_0060 -
19695338-19695477,19695641-19695734,19695818-19695973,
19696109-19696168,19696384-19696602,19696607-19697036,
19698428-19698747
Length = 472
Score = 31.1 bits (67), Expect = 0.84
Identities = 32/170 (18%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Frame = +3
Query: 123 KPAVNLGQGFPD-YHAPKHVTEALSQIATSENPLLHQ-YTRGFGLPRLVENLSKVYSPLI 296
+ + +G G P + + +A+ +A + H Y+ GL ++++ S +
Sbjct: 58 RAVIPMGHGDPSVFPCFRTTADAVDAVAAALRSGEHNSYSSCVGLEPARRSIARYLSRDL 117
Query: 297 GRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIAL 476
++ A +++ +TSG +A+ G ++ P + ++ G R+ L
Sbjct: 118 PYELSA-DDVYLTSGCAQAIEIICSVLARPGANILCPRPGYLFHEARAVFNGMEVRYFDL 176
Query: 477 KPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQREL 626
P+ + W +D + L + T +++ P NP G V+T L
Sbjct: 177 LPE--------SGWEVDLDGVQELADKNTVAMVIINPGNPCGNVYTSEHL 218
>06_02_0276 +
13678457-13678734,13679592-13679931,13680025-13680243,
13680328-13680420
Length = 309
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 495 DDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQREL 626
D + W ++ + +L + T I++ P+NP G V+T L
Sbjct: 161 DLVPERGWEINVEAVEALADENTVAIVITNPNNPCGNVYTYEHL 204
>05_02_0035 -
5872635-5873538,5873679-5873839,5873958-5874077,
5874202-5874330
Length = 437
Score = 31.1 bits (67), Expect = 0.84
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +3
Query: 318 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 497
+ +++T+GA A D GD +++ PY+ +D ++ GV G
Sbjct: 102 DRVVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVNIVPVSCDSAAGF 161
Query: 498 DISSADW--VLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELE 629
+++ DEA A R + +++ P NPLG + LE
Sbjct: 162 QVTAGALRAAYDEAVAAG---TRVRGVLITNPSNPLGTTAARGVLE 204
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 613 PNASWKLIADLCKKHNVLCLSD 678
P+ K + DLC +HN+L ++D
Sbjct: 243 PDGYLKAVRDLCSRHNILMIAD 264
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 105 VCTQPIRFSHQLHNVPAIETFLPL 34
+C P+ F++ L N PA ETFLPL
Sbjct: 294 MCAAPVVFNN-LINAPASETFLPL 316
>01_06_1103 -
34543915-34543955,34544069-34544137,34544294-34544395,
34545603-34545708,34545998-34546079,34546850-34547142
Length = 230
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 214 IHCFISTQEALVCRASWRIYQRFTPR 291
+HCF+S Q A + R W +RF R
Sbjct: 19 LHCFLSLQTARLPRDDWASEERFQSR 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,606,385
Number of Sequences: 37544
Number of extensions: 420576
Number of successful extensions: 978
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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