Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30869
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   5.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.9  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 12  FDISNA*INFGIWLGFGETTN 74
           +D     INFG W+  GE  N
Sbjct: 178 YDTHRCRINFGSWVHSGEEVN 198


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 430 TSFCSFCVTVRAHRIIS 480
           TS+C  C++ RA ++++
Sbjct: 295 TSYCKTCISGRAFQVLT 311


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 79  ISSLSNQNLLCAKLYFELTSKKGCVYSCTRVKSYT 183
           I  L+  N    +  FELT++KG V+     + +T
Sbjct: 96  IEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHT 130


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 2   FFMFRHKQCLNKLW 43
           F+ F HKQ LN+ +
Sbjct: 257 FYFFLHKQVLNRYY 270


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 2   FFMFRHKQCLNKLW 43
           F+ F HKQ LN+ +
Sbjct: 257 FYFFLHKQVLNRYY 270


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 589 YL*LSFDIVLKNPPSYKILYENVFE 515
           YL +    V  NP   K+ +EN+F+
Sbjct: 173 YLRIKKHAVKFNPAKVKLRFENLFD 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,205
Number of Sequences: 438
Number of extensions: 2540
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)