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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30868
         (708 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom...    44   2e-05
SPAC22A12.06c |||serine hydrolase|Schizosaccharomyces pombe|chr ...    33   0.040
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||...    27   2.6  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    27   3.5  
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein...    26   4.6  
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe...    26   4.6  
SPBC776.07 |||mitochondrial Mam33 family protein|Schizosaccharom...    26   6.1  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    26   6.1  
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch...    26   6.1  

>SPCC1223.08c |dfr1||dihydrofolate reductase
           Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 461

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +3

Query: 309 LKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAP 425
           LK+L  HG+ Q+G VF  K+GS +K ++KYA+L F + P
Sbjct: 5   LKVLCLHGWIQSGPVFSKKMGSVQKYLSKYAELHFPTGP 43


>SPAC22A12.06c |||serine hydrolase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 429

 Score = 33.1 bits (72), Expect = 0.040
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 306 KLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAP 425
           K KIL  HGY ++G +F  K+ + R+ +A      F + P
Sbjct: 6   KSKILCIHGYAESGELFSVKLRALRERMADSVDFYFPTGP 45


>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 1157

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
 Frame = -3

Query: 637 PISP--PNMLPCEKPIN--------PWKGPCS--STTNSINLKVSSKPTAGPPKHLPLNV 494
           P+SP  PN L   KPI+        P + P S  S   S++      P       +PL+ 
Sbjct: 189 PVSPSNPNFLTPLKPIDGNQEWQQSPLESPLSMHSLQESLHSVEPESPIFQQAPQIPLSN 248

Query: 493 LSSE--LNHHERESSLPLPSFKTL*GAEIKVSCAYLATAFRN 374
            S +  +NH    +SLP  SF     +  +VS +  A   +N
Sbjct: 249 ASQQSYINHSSDGASLPQSSFLNFNSSGKRVSVSAAAQQHKN 290


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -3

Query: 595 NPWKGPCSSTTNSINLKVSSKPT--AGPPKHLPLNVLSSELNHHERESSLPLPSFKTL 428
           NPWK  CS T  +    V +  T  +  P    LN L + +     ++ + LP   TL
Sbjct: 237 NPWKRACSQTDGTYRSYVHNPSTLLSILPISRELNSLLNRIFDRNPKTRITLPELSTL 294


>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 715

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -3

Query: 625 PNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSLPL 446
           P  LP +K   P K    S ++ +    SS        HL  ++ S+ELN     SS+ L
Sbjct: 434 PLALPNKKAFQPVKFRVPSFSSPLVKPASSSSFGRSHSHLGTSLRSNELNGSSASSSIFL 493

Query: 445 PS 440
            S
Sbjct: 494 QS 495


>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 727

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = -3

Query: 679 NRRHTLNILFVAWPPISPPNMLPCEKPINPWKGPCSSTTNS--INLKVSSKPTAGPPKHL 506
           N +H++N+  +   P  PP  +     I     P S+ TNS   +   +      PP HL
Sbjct: 554 NTQHSINLHTIVPSPYEPPLSVTPSTAITNLSIPESNRTNSSASSKSFTMNDLILPPLHL 613

Query: 505 PLNVLSSELNHHERESS 455
             N   +   H + +SS
Sbjct: 614 K-NTTQTNNAHEDAQSS 629


>SPBC776.07 |||mitochondrial Mam33 family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 538 SKPTAGPPKHLPLNVLSSELNHHERE--SSLPLP 443
           S  TAG P+   +N LSSE+++ + +  S + LP
Sbjct: 50  SSHTAGNPRSKLINALSSEIDYEKNQVLSEISLP 83


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPP 515
           PPI PP+      P N    P +  + +  +  +SKP   PP
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295


>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 815

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 508 LPLNVLSSELNHHERESSLPLPSF 437
           + +N LSS LN+H +  S+  PSF
Sbjct: 702 IDINTLSSMLNYHTQAVSIHHPSF 725


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,844,591
Number of Sequences: 5004
Number of extensions: 58972
Number of successful extensions: 152
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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