Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30868
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041170-1|AAH41170.1| 227|Homo sapiens candidate tumor suppres... 52 2e-06
AF335321-1|AAN04659.1| 227|Homo sapiens ovca2 protein. 52 2e-06
AF321875-1|AAL35713.1| 227|Homo sapiens candidate tumor suppres... 52 2e-06
AF073528-1|AAC62628.1| 227|Homo sapiens ovarian cancer gene-2 p... 52 2e-06
BC040696-1|AAH40696.1| 227|Homo sapiens candidate tumor suppres... 50 6e-06
AK126892-1|BAC86738.1| 201|Homo sapiens protein ( Homo sapiens ... 34 0.43
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 33 1.0
AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein pr... 33 1.0
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 33 1.0
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 33 1.0
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 33 1.0
>BC041170-1|AAH41170.1| 227|Homo sapiens candidate tumor suppressor
in ovarian cancer 2 protein.
Length = 227
Score = 52.4 bits (120), Expect = 2e-06
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Frame = +3
Query: 300 QPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLN----DGSGS---- 455
Q L++L G+RQ+ FR K G+ RKA+ A+L +S PH V + +G+ S
Sbjct: 4 QRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGS 63
Query: 456 ----EDSRSWWFNSED-NTFSGKCLGGPAV--GFEETLRLIELVVEEHGP 584
E R WWF+ ++ + FS L PAV G EE+L ++ + GP
Sbjct: 64 CPPEEQPRGWWFSEQEADVFS--ALEEPAVCRGLEESLGMVAQALNRLGP 111
>AF335321-1|AAN04659.1| 227|Homo sapiens ovca2 protein.
Length = 227
Score = 52.4 bits (120), Expect = 2e-06
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Frame = +3
Query: 300 QPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLN----DGSGS---- 455
Q L++L G+RQ+ FR K G+ RKA+ A+L +S PH V + +G+ S
Sbjct: 4 QRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGS 63
Query: 456 ----EDSRSWWFNSED-NTFSGKCLGGPAV--GFEETLRLIELVVEEHGP 584
E R WWF+ ++ + FS L PAV G EE+L ++ + GP
Sbjct: 64 CPPEEQPRGWWFSEQEADVFS--ALEEPAVCRGLEESLGMVAQALNRLGP 111
>AF321875-1|AAL35713.1| 227|Homo sapiens candidate tumor suppressor
OVCA2 protein.
Length = 227
Score = 52.4 bits (120), Expect = 2e-06
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Frame = +3
Query: 300 QPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLN----DGSGS---- 455
Q L++L G+RQ+ FR K G+ RKA+ A+L +S PH V + +G+ S
Sbjct: 4 QRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGS 63
Query: 456 ----EDSRSWWFNSED-NTFSGKCLGGPAV--GFEETLRLIELVVEEHGP 584
E R WWF+ ++ + FS L PAV G EE+L ++ + GP
Sbjct: 64 CPPEEQPRGWWFSEQEADVFS--ALEEPAVCRGLEESLGMVAQALNRLGP 111
>AF073528-1|AAC62628.1| 227|Homo sapiens ovarian cancer gene-2
protein protein.
Length = 227
Score = 52.4 bits (120), Expect = 2e-06
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Frame = +3
Query: 300 QPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLN----DGSGS---- 455
Q L++L G+RQ+ FR K G+ RKA+ A+L +S PH V + +G+ S
Sbjct: 4 QRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGS 63
Query: 456 ----EDSRSWWFNSED-NTFSGKCLGGPAV--GFEETLRLIELVVEEHGP 584
E R WWF+ ++ + FS L PAV G EE+L ++ + GP
Sbjct: 64 CPPEEQPRGWWFSEQEADVFS--ALEEPAVCRGLEESLGMVAQALNRLGP 111
>BC040696-1|AAH40696.1| 227|Homo sapiens candidate tumor suppressor
in ovarian cancer 2 protein.
Length = 227
Score = 50.4 bits (115), Expect = 6e-06
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Frame = +3
Query: 300 QPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLN----DGSGS---- 455
Q L++L G+RQ+ FR K G+ RKA+ A+L +S PH V + +G+ S
Sbjct: 4 QRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGS 63
Query: 456 ----EDSRSWWFNSEDNTFSGKCLGGPAV--GFEETLRLIELVVEEHGP 584
E R WWF SE L PAV G EE+L ++ + GP
Sbjct: 64 CPPEEQPRGWWF-SEQEADVFCALEEPAVCRGLEESLGMVAQALNRLGP 111
>AK126892-1|BAC86738.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ44944 fis, clone BRAMY4001234. ).
Length = 201
Score = 34.3 bits (75), Expect = 0.43
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Frame = -3
Query: 625 PNMLPCEKPINPWKGPCSSTTNSINLKVSSKPT---AGPP-------KHLPLNVLSSELN 476
P LPC + PW+ PC+ST S +S+PT GPP H+P LS +L
Sbjct: 21 PRRLPCVLLLLPWRLPCTSTHASTG-TAASQPTQCSEGPPAPLCHSHSHVPPETLSPQL- 78
Query: 475 HHERESSLPLPSFKTL*GAE 416
H P+ + GAE
Sbjct: 79 HRVSPQQAQGPAHQPSAGAE 98
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 33.1 bits (72), Expect = 1.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERE 461
P + P P K ++PW G T + + K +P P PL + +S L+H E
Sbjct: 448 PALGHPESTP--KSLHPWYG----ITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPP 501
Query: 460 SSLPLPS 440
S+ P P+
Sbjct: 502 SATPSPA 508
>AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERE 461
P + P P K ++PW G T + + K +P P PL + +S L+H E
Sbjct: 242 PALGHPESTP--KSLHPWYG----ITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPP 295
Query: 460 SSLPLPS 440
S+ P P+
Sbjct: 296 SATPSPA 302
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 33.1 bits (72), Expect = 1.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERE 461
P + P P K ++PW G T + + K +P P PL + +S L+H E
Sbjct: 448 PALGHPESTP--KSLHPWYG----ITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPP 501
Query: 460 SSLPLPS 440
S+ P P+
Sbjct: 502 SATPSPA 508
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 33.1 bits (72), Expect = 1.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERE 461
P + P P K ++PW G T + + K +P P PL + +S L+H E
Sbjct: 448 PALGHPESTP--KSLHPWYG----ITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPP 501
Query: 460 SSLPLPS 440
S+ P P+
Sbjct: 502 SATPSPA 508
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 33.1 bits (72), Expect = 1.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERE 461
P + P P K ++PW G T + + K +P P PL + +S L+H E
Sbjct: 376 PALGHPESTP--KSLHPWYG----ITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPP 429
Query: 460 SSLPLPS 440
S+ P P+
Sbjct: 430 SATPSPA 436
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,945,535
Number of Sequences: 237096
Number of extensions: 2255607
Number of successful extensions: 5190
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5181
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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