BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30868 (708 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70680-1|CAA94571.1| 221|Caenorhabditis elegans Hypothetical pr... 82 3e-16 AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 29 4.3 U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 28 7.5 Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 27 9.9 Z66516-3|CAA91356.1| 79|Caenorhabditis elegans Hypothetical pr... 27 9.9 >Z70680-1|CAA94571.1| 221|Caenorhabditis elegans Hypothetical protein C25G4.2 protein. Length = 221 Score = 82.2 bits (194), Expect = 3e-16 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Frame = +3 Query: 294 TEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLNDGSGSEDSRSW 473 + QPKL+IL HGYRQ FR K GS RK V A+ F++ H V D + SR+W Sbjct: 2 SSQPKLRILCLHGYRQCDQSFRQKTGSTRKLVKSLAEFEFVNGVHSVAVD-EHVDSSRAW 60 Query: 474 WF-NSEDNTFSGKCLGGPAVGFEETLRLIELVVEEHGP 584 WF N+E +FS + AVGFEE++ + +EE+GP Sbjct: 61 WFSNNEAMSFSSRESTEVAVGFEESVAAVVKFIEENGP 98 >AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical protein Y55F3BR.2 protein. Length = 1594 Score = 28.7 bits (61), Expect = 4.3 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503 P SP N EKP P S+T +I + SKP P +H P Sbjct: 1400 PKNSPKNAT--EKPTEPPTTQASTTVGAIIVTKKSKPIKVPAQHCP 1443 >U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical protein R07G3.6 protein. Length = 304 Score = 27.9 bits (59), Expect = 7.5 Identities = 25/74 (33%), Positives = 34/74 (45%) Frame = -3 Query: 655 LFVAWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELN 476 +F PP PP EKPI P T N + +K+ + P+ PP+ L E N Sbjct: 207 IFTVPPP--PPLFQEWEKPILSLSNPF--TLNPL-MKMFTTPS--PPQTLAPLPKIPEPN 259 Query: 475 HHERESSLPLPSFK 434 +E + LP P FK Sbjct: 260 PYEIKKGLPEPQFK 273 >Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical protein C50B6.3 protein. Length = 526 Score = 27.5 bits (58), Expect = 9.9 Identities = 18/68 (26%), Positives = 27/68 (39%) Frame = -3 Query: 631 SPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSL 452 +P +K P K P S+T S P K P+N ++ + +SL Sbjct: 323 APDGFKIVQKGGRPRKYPASATKKRKKKTPRSSPKKKMSKESPINHQKEPIDEQKPSTSL 382 Query: 451 PLPSFKTL 428 P+ S TL Sbjct: 383 PIYSVATL 390 >Z66516-3|CAA91356.1| 79|Caenorhabditis elegans Hypothetical protein W03C9.5 protein. Length = 79 Score = 27.5 bits (58), Expect = 9.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 571 STTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSLP 449 + TN N + A +H PL+V+S+ L H ES P Sbjct: 22 TVTNHYNEAGTGPLEAAICRHNPLHVVSAALRHQHEESQCP 62 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,873,443 Number of Sequences: 27780 Number of extensions: 338097 Number of successful extensions: 895 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 893 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1645110168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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