Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30868
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical pr...    82   3e-16
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    29   4.3  
U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81050-2|CAB02852.1|  526|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z66516-3|CAA91356.1|   79|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical
           protein C25G4.2 protein.
          Length = 221

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = +3

Query: 294 TEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLNDGSGSEDSRSW 473
           + QPKL+IL  HGYRQ    FR K GS RK V   A+  F++  H V  D    + SR+W
Sbjct: 2   SSQPKLRILCLHGYRQCDQSFRQKTGSTRKLVKSLAEFEFVNGVHSVAVD-EHVDSSRAW 60

Query: 474 WF-NSEDNTFSGKCLGGPAVGFEETLRLIELVVEEHGP 584
           WF N+E  +FS +     AVGFEE++  +   +EE+GP
Sbjct: 61  WFSNNEAMSFSSRESTEVAVGFEESVAAVVKFIEENGP 98


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -3

Query: 640  PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
            P  SP N    EKP  P     S+T  +I +   SKP   P +H P
Sbjct: 1400 PKNSPKNAT--EKPTEPPTTQASTTVGAIIVTKKSKPIKVPAQHCP 1443


>U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical
           protein R07G3.6 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = -3

Query: 655 LFVAWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELN 476
           +F   PP  PP     EKPI     P   T N + +K+ + P+  PP+ L       E N
Sbjct: 207 IFTVPPP--PPLFQEWEKPILSLSNPF--TLNPL-MKMFTTPS--PPQTLAPLPKIPEPN 259

Query: 475 HHERESSLPLPSFK 434
            +E +  LP P FK
Sbjct: 260 PYEIKKGLPEPQFK 273


>Z81050-2|CAB02852.1|  526|Caenorhabditis elegans Hypothetical
           protein C50B6.3 protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/68 (26%), Positives = 27/68 (39%)
 Frame = -3

Query: 631 SPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSL 452
           +P      +K   P K P S+T         S P     K  P+N     ++  +  +SL
Sbjct: 323 APDGFKIVQKGGRPRKYPASATKKRKKKTPRSSPKKKMSKESPINHQKEPIDEQKPSTSL 382

Query: 451 PLPSFKTL 428
           P+ S  TL
Sbjct: 383 PIYSVATL 390


>Z66516-3|CAA91356.1|   79|Caenorhabditis elegans Hypothetical
           protein W03C9.5 protein.
          Length = 79

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 571 STTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSLP 449
           + TN  N   +    A   +H PL+V+S+ L H   ES  P
Sbjct: 22  TVTNHYNEAGTGPLEAAICRHNPLHVVSAALRHQHEESQCP 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,443
Number of Sequences: 27780
Number of extensions: 338097
Number of successful extensions: 895
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)