Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30868
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09280.2 68414.m01038 expressed protein contains Pfam profile... 52 4e-07
At1g09280.1 68414.m01037 expressed protein contains Pfam profile... 52 4e-07
At4g29440.1 68417.m04203 expressed protein contains Pfam profil... 31 0.99
At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, put... 31 0.99
At1g03440.1 68414.m00324 leucine-rich repeat family protein cont... 31 0.99
At4g21690.1 68417.m03141 gibberellin 3 beta-hydroxylase family p... 30 1.3
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 30 1.7
At5g07140.1 68418.m00814 protein kinase family protein contains ... 29 3.0
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 29 4.0
At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 9.2
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 27 9.2
At5g02590.1 68418.m00194 chloroplast lumen common family protein... 27 9.2
At4g24250.1 68417.m03480 seven transmembrane MLO family protein ... 27 9.2
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 27 9.2
At3g15050.1 68416.m01904 calmodulin-binding family protein simil... 27 9.2
>At1g09280.2 68414.m01038 expressed protein contains Pfam profile:
PF03959 domain of unknown function (DUF341)
Length = 575
Score = 52.0 bits (119), Expect = 4e-07
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Frame = +3
Query: 291 DTEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKV------LNDGSG 452
D + KL+IL HG+RQN + F+ + GS K + A+L FI APH++ SG
Sbjct: 342 DNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSG 401
Query: 453 SEDSRSWWFNSED-------NTFSGKCLGGP------AVGFEETLRLIELVVEEHGPXXX 593
+ + W S D +C P GF+++L ++ EE GP
Sbjct: 402 VCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDG 461
Query: 594 XXXXXXXXXXXXLIGGHATKRIFKVCLRFC 683
+ G + + ++ RFC
Sbjct: 462 ILGFSQGAAMAAAVCGKQEQLVGEIDFRFC 491
>At1g09280.1 68414.m01037 expressed protein contains Pfam profile:
PF03959 domain of unknown function (DUF341)
Length = 581
Score = 52.0 bits (119), Expect = 4e-07
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Frame = +3
Query: 291 DTEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKV------LNDGSG 452
D + KL+IL HG+RQN + F+ + GS K + A+L FI APH++ SG
Sbjct: 348 DNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSG 407
Query: 453 SEDSRSWWFNSED-------NTFSGKCLGGP------AVGFEETLRLIELVVEEHGPXXX 593
+ + W S D +C P GF+++L ++ EE GP
Sbjct: 408 VCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDG 467
Query: 594 XXXXXXXXXXXXLIGGHATKRIFKVCLRFC 683
+ G + + ++ RFC
Sbjct: 468 ILGFSQGAAMAAAVCGKQEQLVGEIDFRFC 497
>At4g29440.1 68417.m04203 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 1090
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 631 SPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
SPP ++P EKP +G SS + +S PPK LP
Sbjct: 955 SPPKLVPKEKPAAKQRGSASSLSFLPKTDKASPDQDSPPKLLP 997
>At1g49100.1 68414.m05505 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 888
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 594 IHGKVHAPPPPTQLISKFLQNPQPDLLSTCR*MCCLL 484
++GKV+ P +++S +PQPD TC+ CLL
Sbjct: 299 LNGKVYYGPYSPKMLSIDTMSPQPDSTLTCKGGSCLL 335
>At1g03440.1 68414.m00324 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 397
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 351 VFRAKIGSFRKAVAKYAQLTFISAPHKVLNDGSGSEDSRSWWFNSEDNTFSGKCLGGPAV 530
+F + G F +A+ + A K L+D GS+ SW F S+ F+G G V
Sbjct: 13 MFLLRFGFFTEAILDPVDFLALQAIRKSLDDLPGSKFFESWDFTSDPCGFAGVYCNGDKV 72
>At4g21690.1 68417.m03141 gibberellin 3 beta-hydroxylase family
protein similar to gibberellin 3 beta-hydroxylase
[GI:4164145][Lactuca sativa], 3b-hydroxylase, Solanum
lycopersicum, AB010992; contains PF03171 2OG-Fe(II)
oxygenase superfamily domain
Length = 349
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 571 STTNSINLKVSSKPTAGPPKHLPLNVLSSELNH 473
+ N + +VS+ AGPPK+L + L+S+ NH
Sbjct: 288 AVVNKTHHRVSAAYFAGPPKNLQIGPLTSDKNH 320
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
PP+ PP P + P P P +K +KP PP + P
Sbjct: 122 PPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPP 167
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 646 AWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500
A PP+ PP P + P+ P P S K KP PP P+
Sbjct: 84 AKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPV 132
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500
PP+ PP P + P+ P P S K KP PP P+
Sbjct: 158 PPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPV 204
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500
PP+ PP P + P+ P P + K KP PP P+
Sbjct: 106 PPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPV 152
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
PP+ PP P + P P P +K +KP PP P
Sbjct: 142 PPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPP 187
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
PP+ PP P + P+ P P + + +KP PP + P
Sbjct: 178 PPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPP 223
>At5g07140.1 68418.m00814 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 583
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 447 SGSEDSRSWWFNSEDNTFSGKCLGGPAVGFEETLRLIELVVEE 575
SG +D R W NS+D FSG+ GP F+ R ++ +E+
Sbjct: 312 SGGDDIRKWLLNSDDLEFSGQL--GPN-SFKGVYRGTKVAIEK 351
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/99 (21%), Positives = 37/99 (37%)
Frame = -3
Query: 664 LNILFVAWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSS 485
L +L ++W + P P + P +P P S + ++P PP H P +
Sbjct: 11 LALLCLSWALLVSPTRPPSQPPSHPPIQPSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTP 70
Query: 484 ELNHHERESSLPLPSFKTL*GAEIKVSCAYLATAFRNDP 368
+ + S PLP C + +A ++ P
Sbjct: 71 PPSQSPSQPS-PLPPNIACKSTPYPKLCRTILSAVKSSP 108
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKP 530
PP +P ++P EKPI GP S+ N N SS P
Sbjct: 194 PPPTPLPVVPREKPIAKPTGPASNNGN--NTLPSSSP 228
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 630 AHQTCSPVRNP*IHGKVHAPPPPTQLISKFL 538
A++ SP P +G+V+ PPPP + + FL
Sbjct: 64 AYKRYSPPPPPSKYGRVYPPPPPGKSLWSFL 94
>At5g02590.1 68418.m00194 chloroplast lumen common family protein
various predicted proteins, Arabidopsis thaliana
Length = 326
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 648 LHGRQ*AHQTCSPVRNP*IHGKVHAPPPPTQL-ISKFLQNPQPDLLSTCR*MCCLLN*TT 472
LH R H+ P P + +H PPP + S F NP+P L T C L
Sbjct: 14 LHLRLDTHRKPQP--KPVSYRILHKPPPSRVIRASSFSSNPKPSFLKT---TCVTLTTAA 68
Query: 471 --MSANLH 454
+SA+LH
Sbjct: 69 ALLSASLH 76
>At4g24250.1 68417.m03480 seven transmembrane MLO family protein /
MLO-like protein 13 (MLO13) identical to membrane
protein Mlo13 [Arabidopsis thaliana]
gi|14091596|gb|AAK53806; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 478
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 658 ILFVAWPPISPPNMLPCEKPINPWKGPCSS 569
I + PP NM PC+KP+ P SS
Sbjct: 78 IRHICVPPALVNNMFPCKKPLEEHHAPKSS 107
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 610 CEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSLPLP 443
C P NP +TTNS + ++ +P PP PL+ +++ +HH R S P P
Sbjct: 79 CRPPSNP------ATTNSGHHQL--RPPPPPPP--PLSAITTTGHHHHRRSPPPPP 124
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 621 TCSPVRNP*IHGKVHAPPPPTQLISKFLQN 532
T +P+ N H ++H PPP T + + + N
Sbjct: 187 TTTPITNTSDHHQLHPPPPATTITTTTISN 216
>At3g15050.1 68416.m01904 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 259
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 604 KPINPWKGPCSSTTNSINLKVSSKP 530
KPI P K P S+ N++ K S+KP
Sbjct: 223 KPIKPSKKPEKSSPNNVITKTSAKP 247
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,988
Number of Sequences: 28952
Number of extensions: 312044
Number of successful extensions: 974
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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