BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30868 (708 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09280.2 68414.m01038 expressed protein contains Pfam profile... 52 4e-07 At1g09280.1 68414.m01037 expressed protein contains Pfam profile... 52 4e-07 At4g29440.1 68417.m04203 expressed protein contains Pfam profil... 31 0.99 At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, put... 31 0.99 At1g03440.1 68414.m00324 leucine-rich repeat family protein cont... 31 0.99 At4g21690.1 68417.m03141 gibberellin 3 beta-hydroxylase family p... 30 1.3 At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 30 1.7 At5g07140.1 68418.m00814 protein kinase family protein contains ... 29 3.0 At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 29 4.0 At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 9.2 At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 27 9.2 At5g02590.1 68418.m00194 chloroplast lumen common family protein... 27 9.2 At4g24250.1 68417.m03480 seven transmembrane MLO family protein ... 27 9.2 At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 27 9.2 At3g15050.1 68416.m01904 calmodulin-binding family protein simil... 27 9.2 >At1g09280.2 68414.m01038 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) Length = 575 Score = 52.0 bits (119), Expect = 4e-07 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%) Frame = +3 Query: 291 DTEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKV------LNDGSG 452 D + KL+IL HG+RQN + F+ + GS K + A+L FI APH++ SG Sbjct: 342 DNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSG 401 Query: 453 SEDSRSWWFNSED-------NTFSGKCLGGP------AVGFEETLRLIELVVEEHGPXXX 593 + + W S D +C P GF+++L ++ EE GP Sbjct: 402 VCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDG 461 Query: 594 XXXXXXXXXXXXLIGGHATKRIFKVCLRFC 683 + G + + ++ RFC Sbjct: 462 ILGFSQGAAMAAAVCGKQEQLVGEIDFRFC 491 >At1g09280.1 68414.m01037 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) Length = 581 Score = 52.0 bits (119), Expect = 4e-07 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%) Frame = +3 Query: 291 DTEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKV------LNDGSG 452 D + KL+IL HG+RQN + F+ + GS K + A+L FI APH++ SG Sbjct: 348 DNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSG 407 Query: 453 SEDSRSWWFNSED-------NTFSGKCLGGP------AVGFEETLRLIELVVEEHGPXXX 593 + + W S D +C P GF+++L ++ EE GP Sbjct: 408 VCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDG 467 Query: 594 XXXXXXXXXXXXLIGGHATKRIFKVCLRFC 683 + G + + ++ RFC Sbjct: 468 ILGFSQGAAMAAAVCGKQEQLVGEIDFRFC 497 >At4g29440.1 68417.m04203 expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292 Length = 1090 Score = 30.7 bits (66), Expect = 0.99 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -3 Query: 631 SPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503 SPP ++P EKP +G SS + +S PPK LP Sbjct: 955 SPPKLVPKEKPAAKQRGSASSLSFLPKTDKASPDQDSPPKLLP 997 >At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 888 Score = 30.7 bits (66), Expect = 0.99 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 594 IHGKVHAPPPPTQLISKFLQNPQPDLLSTCR*MCCLL 484 ++GKV+ P +++S +PQPD TC+ CLL Sbjct: 299 LNGKVYYGPYSPKMLSIDTMSPQPDSTLTCKGGSCLL 335 >At1g03440.1 68414.m00324 leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611 Length = 397 Score = 30.7 bits (66), Expect = 0.99 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = +3 Query: 351 VFRAKIGSFRKAVAKYAQLTFISAPHKVLNDGSGSEDSRSWWFNSEDNTFSGKCLGGPAV 530 +F + G F +A+ + A K L+D GS+ SW F S+ F+G G V Sbjct: 13 MFLLRFGFFTEAILDPVDFLALQAIRKSLDDLPGSKFFESWDFTSDPCGFAGVYCNGDKV 72 >At4g21690.1 68417.m03141 gibberellin 3 beta-hydroxylase family protein similar to gibberellin 3 beta-hydroxylase [GI:4164145][Lactuca sativa], 3b-hydroxylase, Solanum lycopersicum, AB010992; contains PF03171 2OG-Fe(II) oxygenase superfamily domain Length = 349 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 571 STTNSINLKVSSKPTAGPPKHLPLNVLSSELNH 473 + N + +VS+ AGPPK+L + L+S+ NH Sbjct: 288 AVVNKTHHRVSAAYFAGPPKNLQIGPLTSDKNH 320 >At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin family protein similar to arabinogalactan protein [Daucus carota] GI:11322245; contains Pfam profile PF01190: Pollen proteins Ole e I family Length = 359 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503 PP+ PP P + P P P +K +KP PP + P Sbjct: 122 PPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPP 167 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = -3 Query: 646 AWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500 A PP+ PP P + P+ P P S K KP PP P+ Sbjct: 84 AKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPV 132 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/47 (31%), Positives = 19/47 (40%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500 PP+ PP P + P+ P P S K KP PP P+ Sbjct: 158 PPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPV 204 Score = 28.7 bits (61), Expect = 4.0 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPL 500 PP+ PP P + P+ P P + K KP PP P+ Sbjct: 106 PPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPV 152 Score = 28.7 bits (61), Expect = 4.0 Identities = 14/46 (30%), Positives = 18/46 (39%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503 PP+ PP P + P P P +K +KP PP P Sbjct: 142 PPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPP 187 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503 PP+ PP P + P+ P P + + +KP PP + P Sbjct: 178 PPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPP 223 >At5g07140.1 68418.m00814 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 583 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 Query: 447 SGSEDSRSWWFNSEDNTFSGKCLGGPAVGFEETLRLIELVVEE 575 SG +D R W NS+D FSG+ GP F+ R ++ +E+ Sbjct: 312 SGGDDIRKWLLNSDDLEFSGQL--GPN-SFKGVYRGTKVAIEK 351 >At5g04970.1 68418.m00526 pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase Length = 624 Score = 28.7 bits (61), Expect = 4.0 Identities = 21/99 (21%), Positives = 37/99 (37%) Frame = -3 Query: 664 LNILFVAWPPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSS 485 L +L ++W + P P + P +P P S + ++P PP H P + Sbjct: 11 LALLCLSWALLVSPTRPPSQPPSHPPIQPSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTP 70 Query: 484 ELNHHERESSLPLPSFKTL*GAEIKVSCAYLATAFRNDP 368 + + S PLP C + +A ++ P Sbjct: 71 PPSQSPSQPS-PLPPNIACKSTPYPKLCRTILSAVKSSP 108 >At5g38560.1 68418.m04662 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 681 Score = 27.5 bits (58), Expect = 9.2 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 640 PPISPPNMLPCEKPINPWKGPCSSTTNSINLKVSSKP 530 PP +P ++P EKPI GP S+ N N SS P Sbjct: 194 PPPTPLPVVPREKPIAKPTGPASNNGN--NTLPSSSP 228 >At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family protein similar to extensin [Catharanthus roseus] gi|1486263|dbj|BAA13175; contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 96 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -1 Query: 630 AHQTCSPVRNP*IHGKVHAPPPPTQLISKFL 538 A++ SP P +G+V+ PPPP + + FL Sbjct: 64 AYKRYSPPPPPSKYGRVYPPPPPGKSLWSFL 94 >At5g02590.1 68418.m00194 chloroplast lumen common family protein various predicted proteins, Arabidopsis thaliana Length = 326 Score = 27.5 bits (58), Expect = 9.2 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Frame = -1 Query: 648 LHGRQ*AHQTCSPVRNP*IHGKVHAPPPPTQL-ISKFLQNPQPDLLSTCR*MCCLLN*TT 472 LH R H+ P P + +H PPP + S F NP+P L T C L Sbjct: 14 LHLRLDTHRKPQP--KPVSYRILHKPPPSRVIRASSFSSNPKPSFLKT---TCVTLTTAA 68 Query: 471 --MSANLH 454 +SA+LH Sbjct: 69 ALLSASLH 76 >At4g24250.1 68417.m03480 seven transmembrane MLO family protein / MLO-like protein 13 (MLO13) identical to membrane protein Mlo13 [Arabidopsis thaliana] gi|14091596|gb|AAK53806; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley] Length = 478 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -3 Query: 658 ILFVAWPPISPPNMLPCEKPINPWKGPCSS 569 I + PP NM PC+KP+ P SS Sbjct: 78 IRHICVPPALVNNMFPCKKPLEEHHAPKSS 107 >At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to hydroxyproline-rich glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765 Length = 219 Score = 27.5 bits (58), Expect = 9.2 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = -3 Query: 610 CEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELNHHERESSLPLP 443 C P NP +TTNS + ++ +P PP PL+ +++ +HH R S P P Sbjct: 79 CRPPSNP------ATTNSGHHQL--RPPPPPPP--PLSAITTTGHHHHRRSPPPPP 124 Score = 27.5 bits (58), Expect = 9.2 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = -1 Query: 621 TCSPVRNP*IHGKVHAPPPPTQLISKFLQN 532 T +P+ N H ++H PPP T + + + N Sbjct: 187 TTTPITNTSDHHQLHPPPPATTITTTTISN 216 >At3g15050.1 68416.m01904 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 259 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 604 KPINPWKGPCSSTTNSINLKVSSKP 530 KPI P K P S+ N++ K S+KP Sbjct: 223 KPIKPSKKPEKSSPNNVITKTSAKP 247 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,804,988 Number of Sequences: 28952 Number of extensions: 312044 Number of successful extensions: 974 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 943 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1526202912 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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