Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30867
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY665384-1|AAT76551.1|  514|Drosophila melanogaster CG4928 protein.    29   8.2  
AF145657-1|AAD38632.1|  538|Drosophila melanogaster BcDNA.GH1012...    29   8.2  
AE014298-2503|AAF48682.1|  538|Drosophila melanogaster CG4928-PB...    29   8.2  
AE014298-2502|AAN09429.1|  538|Drosophila melanogaster CG4928-PA...    29   8.2  

>AY665384-1|AAT76551.1|  514|Drosophila melanogaster CG4928 protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +3

Query: 81  VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236
           VS+S    ++++SC +   LII   T K+T+ C M LC + Y   Q + + Y
Sbjct: 70  VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 120


>AF145657-1|AAD38632.1|  538|Drosophila melanogaster BcDNA.GH10120
           protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +3

Query: 81  VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236
           VS+S    ++++SC +   LII   T K+T+ C M LC + Y   Q + + Y
Sbjct: 79  VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129


>AE014298-2503|AAF48682.1|  538|Drosophila melanogaster CG4928-PB,
           isoform B protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +3

Query: 81  VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236
           VS+S    ++++SC +   LII   T K+T+ C M LC + Y   Q + + Y
Sbjct: 79  VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129


>AE014298-2502|AAN09429.1|  538|Drosophila melanogaster CG4928-PA,
           isoform A protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +3

Query: 81  VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236
           VS+S    ++++SC +   LII   T K+T+ C M LC + Y   Q + + Y
Sbjct: 79  VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,223,076
Number of Sequences: 53049
Number of extensions: 448590
Number of successful extensions: 562
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)