BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30867 (710 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY665384-1|AAT76551.1| 514|Drosophila melanogaster CG4928 protein. 29 8.2 AF145657-1|AAD38632.1| 538|Drosophila melanogaster BcDNA.GH1012... 29 8.2 AE014298-2503|AAF48682.1| 538|Drosophila melanogaster CG4928-PB... 29 8.2 AE014298-2502|AAN09429.1| 538|Drosophila melanogaster CG4928-PA... 29 8.2 >AY665384-1|AAT76551.1| 514|Drosophila melanogaster CG4928 protein. Length = 514 Score = 28.7 bits (61), Expect = 8.2 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 81 VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236 VS+S ++++SC + LII T K+T+ C M LC + Y Q + + Y Sbjct: 70 VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 120 >AF145657-1|AAD38632.1| 538|Drosophila melanogaster BcDNA.GH10120 protein. Length = 538 Score = 28.7 bits (61), Expect = 8.2 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 81 VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236 VS+S ++++SC + LII T K+T+ C M LC + Y Q + + Y Sbjct: 79 VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129 >AE014298-2503|AAF48682.1| 538|Drosophila melanogaster CG4928-PB, isoform B protein. Length = 538 Score = 28.7 bits (61), Expect = 8.2 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 81 VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236 VS+S ++++SC + LII T K+T+ C M LC + Y Q + + Y Sbjct: 79 VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129 >AE014298-2502|AAN09429.1| 538|Drosophila melanogaster CG4928-PA, isoform A protein. Length = 538 Score = 28.7 bits (61), Expect = 8.2 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 81 VSVSDKCLSIILSCNYSLDLIIIIKTYKFTVSCIMFLCSSIYF*IQQYNKSY 236 VS+S ++++SC + LII T K+T+ C M LC + Y Q + + Y Sbjct: 79 VSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSM-LCYAPYIAFQLFPRFY 129 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,223,076 Number of Sequences: 53049 Number of extensions: 448590 Number of successful extensions: 562 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 562 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3149551053 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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